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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1663
candidate regulatory elements
1299
target gene predictions
953
histone modifications
chromatin state
893
accessible chromatin
772
binding sites
682
gene expression
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2508
February, 2021
1626
September, 2022
377
May, 2021
338
February, 2024
333
November, 2021
286
September, 2023
277
June, 2020
152
May, 2020
128
March, 2020
101
August, 2021
83
January, 2020
82
October, 2022
69
March, 2023
56
January, 2021
44
November, 2022
39
May, 2024
38
February, 2020
32
February, 2023
29
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
5
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5718
bed bed3+
872
tsv
536
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6633
Homo sapiens
Biosample type
2258
primary cell
2010
tissue
1981
cell line
426
in vitro differentiated cells
3
stem cell
Organ
903
epithelium
571
kidney
399
connective tissue
365
brain
294
musculature of body
245
pancreas
239
lung
230
vasculature
227
intestine
200
heart
189
bodily fluid
189
limb
187
embryo
blood
170
blood vessel
166
skin of body
136
large intestine
133
liver
112
extraembryonic component
99
eye
94
stomach
78
uterus
74
bone element
72
mammary gland
66
adipose tissue
64
prostate gland
63
small intestine
62
artery
58
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
39
gonad
38
thymus
35
esophagus
33
spinal cord
27
spleen
22
lymphatic vessel
20
testis
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
18
vein
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5976
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
2
ITG
Genome assembly (visualization)
5802
hg19
879
GRCh38
1
hg18
annotation_type!
chromatin state
eQTL
organ_slims!
blood
skeleton
BIOSAMPLE
TYPE
6680 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
3
7
1
15
2
9
2
2
B cell
17
10
6
2
+ See 438 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
7
1
brain
29
16
3
2
1
1
1
lung
33
17
1
+ See 238 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
EndoC_BH1
1
1
8
1
8
3
1
MCF-7
9
6
2
1
3
+ See 737 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 121 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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