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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
212
accessible chromatin
122
target gene predictions
110
candidate regulatory elements
92
differential activity
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
4
eQTL
2
caQTL
Date released
127
November, 2021
111
February, 2021
103
September, 2022
62
September, 2023
60
February, 2024
29
March, 2023
25
June, 2020
20
January, 2021
17
May, 2021
15
May, 2020
15
November, 2022
12
February, 2023
12
January, 2020
11
August, 2021
10
May, 2024
7
April, 2020
6
October, 2022
5
October, 2019
2
March, 2020
2
May, 2022
1
February, 2020
1
January, 2022
1
November, 2019
Available data
554
bed bed3+
167
bigWig
90
tsv
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
654
Homo sapiens
Biosample type
547
primary cell
56
tissue
34
cell line
17
in vitro differentiated cells
Organ
653
epithelium
375
brain
373
kidney
371
connective tissue
290
musculature of body
239
lung
227
intestine
212
pancreas
200
vasculature
190
bodily fluid
189
limb
185
heart
181
blood
177
embryo
167
skin of body
151
blood vessel
136
large intestine
117
liver
113
extraembryonic component
99
eye
93
stomach
77
uterus
72
mammary gland
70
bone element
66
adipose tissue
64
prostate gland
64
small intestine
59
artery
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
40
gonad
38
thymus
36
esophagus
34
spinal cord
27
spleen
21
testis
19
lymphatic vessel
19
nerve
18
lymphoid tissue
18
ovary
18
thyroid gland
17
vein
15
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
Project
436
AMP
127
ENCODE
62
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
556
hg19
186
GRCh38
annotation_type!
chromatin state
gene expression
BIOSAMPLE
TYPE
654 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
7
3
2
2
1
1
2
hepatocyte
8
3
2
1
2
4
pancreatic ductal cell
6
3
3
1
1
2
endothelial cell of umbilical vein
2
4
6
2
1
foreskin keratinocyte
4
11
+ See 128 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
esophagus squamous epithelium
1
2
6
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 14 more…
cell line
EndoC_BH1
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
1
2
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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