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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1688
candidate regulatory elements
1345
target gene predictions
histone modifications
chromatin state
846
accessible chromatin
811
binding sites
682
gene expression
170
eQTL
167
differential activity
138
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1728
February, 2021
1648
September, 2022
372
February, 2024
329
November, 2021
286
September, 2023
283
June, 2020
270
May, 2021
150
May, 2020
128
March, 2020
111
August, 2021
106
January, 2022
99
October, 2022
81
January, 2020
70
March, 2023
62
February, 2020
56
January, 2021
41
May, 2024
30
March, 2024
22
November, 2022
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
8
February, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4837
bed bed3+
898
tsv
500
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5910
Homo sapiens
Biosample type
2084
primary cell
1974
tissue
1569
cell line
326
in vitro differentiated cells
3
stem cell
Organ
878
epithelium
569
kidney
395
connective tissue
346
brain
294
musculature of body
254
pancreas
236
lung
228
vasculature
222
intestine
200
heart
192
limb
176
embryo
170
blood vessel
166
bodily fluid
158
blood
156
skin of body
133
large intestine
127
liver
108
extraembryonic component
eye
94
stomach
78
adipose tissue
77
uterus
68
bone element
67
mammary gland
64
small intestine
62
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
41
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
lymphatic vessel
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphoid tissue
17
vein
15
mouth
skeleton
13
bronchus
12
pituitary gland
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
5253
AMP
329
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4974
hg19
921
GRCh38
4
hg18
annotation_type!
chromatin state
histone modifications
organ_slims!
eye
skeleton
BIOSAMPLE
TYPE
5958 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
18
1
15
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
3
7
15
2
9
1
2
2
B cell
17
10
6
2
fibroblast
3
4
16
1
2
6
+ See 418 more…
tissue
heart
37
20
5
1
3
2
stomach
40
21
3
1
1
kidney
29
14
10
1
7
1
1
brain
29
16
2
1
1
2
1
lung
33
17
1
1
+ See 206 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
A549
21
19
1
2
K562
7
23
1
2
EndoC_BH1
1
8
1
8
3
1
+ See 640 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
neural progenitor cell
5
5
10
7
adipocyte
4
6
4
1
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 96 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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