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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
54
target gene predictions
50
gene expression
41
candidate regulatory elements
33
differential activity
chromatin state
18
eQTL
13
variant allelic effects
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
45
September, 2022
35
February, 2021
33
May, 2021
27
February, 2024
22
November, 2021
20
January, 2021
10
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
2
February, 2020
2
March, 2024
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
182
bed bed3+
78
tsv
59
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
292
Homo sapiens
Biosample type
132
primary cell
127
tissue
30
cell line
3
in vitro differentiated cells
Organ
868
epithelium
569
kidney
387
connective tissue
345
brain
294
musculature of body
254
pancreas
236
lung
225
vasculature
222
intestine
198
heart
192
limb
176
embryo
170
blood vessel
166
bodily fluid
158
blood
156
skin of body
133
large intestine
125
liver
108
extraembryonic component
96
eye
94
stomach
78
adipose tissue
77
uterus
68
bone element
67
mammary gland
64
small intestine
62
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
41
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphatic vessel
18
lymphoid tissue
17
vein
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
248
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
196
hg19
55
GRCh38
annotation_type!
chromatin state
histone modifications
BIOSAMPLE
TYPE
292 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
eQTL
variant allelic effects
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 14 more…
tissue
islet of Langerhans
6
1
11
13
1
2
2
2
2
body of pancreas
5
2
8
1
1
3
pancreas
5
5
5
1
1
1
endocrine pancreas
4
7
esophagus muscularis mucosa
1
2
5
1
+ See 12 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic ductal cell
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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