Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
132
candidate regulatory elements
69
target gene predictions
chromatin state
33
accessible chromatin
17
binding sites
9
Fine-mapped variants
8
eQTL
8
variant allelic effects
7
gene expression
histone modifications
Date released
124
September, 2022
90
February, 2021
18
June, 2020
10
March, 2020
8
May, 2020
7
January, 2020
6
February, 2020
5
January, 2022
5
May, 2021
3
March, 2024
3
October, 2022
2
November, 2019
2
November, 2021
Available data
259
bed bed3+
19
tsv
15
bigWig
Organism
283
Homo sapiens
Biosample type
217
tissue
61
cell line
5
primary cell
Organ
868
epithelium
569
kidney
387
connective tissue
346
brain
294
musculature of body
254
pancreas
236
lung
225
vasculature
222
intestine
198
heart
192
limb
176
embryo
170
blood vessel
166
bodily fluid
158
blood
156
skin of body
133
large intestine
125
liver
108
extraembryonic component
96
eye
94
stomach
78
adipose tissue
77
uterus
68
bone element
67
mammary gland
64
small intestine
62
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
41
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphatic vessel
18
lymphoid tissue
17
vein
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
281
AMP
2
ENCODE
Genome assembly (visualization)
271
hg19
33
GRCh38
annotation_type!
chromatin state
histone modifications
BIOSAMPLE
TYPE
283 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
Fine-mapped variants
eQTL
variant allelic effects
gene expression
tissue
muscle of arm
33
16
1
1
muscle of leg
27
14
2
tibial nerve
6
3
3
3
2
2
2
ovary
8
6
1
1
1
tibial artery
3
2
3
3
2
2
1
+ See 20 more…
cell line
GM12864
2
1
1
2
GM12865
2
1
1
2
MM.1S
2
2
1
1
GM10248
2
1
1
1
GM10266
2
1
1
1
+ See 13 more…
primary cell
luteal cell
1
1
Leydig cell
1
fibroblast of arm
1
somatic gonadal cell
1
See all biosamples
Download