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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1508
candidate regulatory elements
1228
target gene predictions
967
histone modifications
chromatin state
831
accessible chromatin
803
binding sites
633
gene expression
154
eQTL
134
differential activity
128
variant allelic effects
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
2485
February, 2021
1499
September, 2022
347
February, 2024
345
May, 2021
304
November, 2021
286
September, 2023
278
June, 2020
145
May, 2020
120
August, 2021
117
March, 2020
100
January, 2022
97
October, 2022
79
January, 2020
62
February, 2020
44
November, 2022
36
January, 2021
31
February, 2023
28
March, 2024
23
March, 2023
16
April, 2020
15
May, 2022
10
November, 2019
3
November, 2020
3
October, 2019
3
September, 2018
2
August, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
Available data
5471
bed bed3+
822
tsv
477
bigWig
108
txt
21
csv
2
bigBed narrowPeak
Organism
6438
Homo sapiens
Biosample type
2116
primary cell
2057
cell line
1885
tissue
423
in vitro differentiated cells
3
stem cell
Organ
896
epithelium
575
kidney
412
connective tissue
394
brain
301
musculature of body
pancreas
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5830
AMP
304
ENCODE
281
KPMP
40
T1D
16
LungMap
9
community
5
ITG
Genome assembly (visualization)
5594
hg19
941
GRCh38
4
hg18
annotation_type!
chromatin state
other
organ_slims!
lung
ovary
pancreas
BIOSAMPLE
TYPE
6485 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
meQTL
pQTL
sQTL
variant to gene
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 421 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
K562
7
23
1
1
2
MCF-7
9
6
2
1
3
breast cancer cell
11
9
+ See 751 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
muscle of arm
33
16
1
1
+ See 243 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 120 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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