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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1621
candidate regulatory elements
1326
target gene predictions
969
histone modifications
chromatin state
877
accessible chromatin
796
binding sites
647
gene expression
165
eQTL
149
differential activity
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
representative DNase hypersensitivity sites
Date released
2539
February, 2021
1627
September, 2022
381
May, 2021
327
November, 2021
302
February, 2024
283
June, 2020
251
September, 2023
127
August, 2021
116
March, 2020
103
January, 2022
94
October, 2022
72
May, 2020
71
January, 2020
66
March, 2023
59
February, 2020
56
January, 2021
44
November, 2022
29
March, 2024
27
February, 2023
16
April, 2020
15
May, 2022
10
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5610
bed bed3+
835
tsv
510
bigWig
106
txt
24
csv
12
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6601
Homo sapiens
Biosample type
2146
cell line
2050
primary cell
2031
tissue
417
in vitro differentiated cells
3
stem cell
Organ
855
epithelium
559
kidney
396
connective tissue
377
brain
294
musculature of body
249
pancreas
239
lung
227
intestine
vasculature
194
heart
191
bodily fluid
187
embryo
186
limb
182
blood
168
skin of body
167
blood vessel
138
large intestine
135
liver
113
extraembryonic component
98
eye
93
stomach
79
uterus
76
adipose tissue
74
bone element
71
mammary gland
64
prostate gland
64
small intestine
artery
58
adrenal gland
57
placenta
54
lymph node
54
penis
48
ureter
42
gonad
38
thymus
36
esophagus
35
spinal cord
28
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
nerve
19
ovary
18
thyroid gland
17
vein
15
mouth
15
skeleton
13
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5984
AMP
327
ENCODE
246
KPMP
59
T1D
16
LungMap
11
community
5
ITG
Genome assembly (visualization)
5738
hg19
947
GRCh38
4
hg18
annotation_type!
chromatin state
representative DNase hypersensitivity sites
variant allelic effects
organ_slims!
artery
vasculature
BIOSAMPLE
TYPE
6648 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
3
+ See 759 more…
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
B cell
14
10
6
2
+ See 407 more…
tissue
heart
37
20
1
5
1
3
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
brain
29
16
3
2
1
1
2
lung
33
17
1
1
+ See 248 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 118 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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