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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1547
candidate regulatory elements
target gene predictions
971
histone modifications
chromatin state
862
accessible chromatin
810
binding sites
480
gene expression
167
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2398
February, 2021
767
September, 2022
273
June, 2020
245
May, 2021
219
November, 2021
198
February, 2024
141
September, 2023
115
May, 2020
104
January, 2022
100
August, 2021
99
October, 2022
81
March, 2020
70
March, 2023
68
January, 2020
55
February, 2020
44
November, 2022
41
May, 2024
32
February, 2023
28
January, 2021
27
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4326
bed bed3+
648
tsv
506
bigWig
24
csv
21
txt
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5135
Homo sapiens
Biosample type
1735
cell line
1650
primary cell
1436
tissue
360
in vitro differentiated cells
Organ
784
epithelium
kidney
342
connective tissue
318
brain
221
musculature of body
216
pancreas
205
vasculature
162
lung
157
heart
157
intestine
151
blood vessel
145
limb
134
bodily fluid
127
blood
125
skin of body
120
liver
103
embryo
94
large intestine
91
eye
77
extraembryonic component
66
adipose tissue
65
stomach
59
artery
58
bone element
53
mammary gland
50
prostate gland
45
lymph node
43
penis
41
small intestine
40
placenta
38
adrenal gland
38
ureter
31
gonad
28
esophagus
26
spinal cord
24
thymus
21
uterus
20
spleen
19
lymphatic vessel
18
nerve
18
testis
14
vein
13
lymphoid tissue
13
thyroid gland
12
ovary
12
skeleton
11
bronchus
11
mouth
8
bone marrow
8
breast
tongue
6
vagina
5
trachea
5
urinary bladder
3
pituitary gland
2
nose
1
pericardium
Project
4756
AMP
219
ENCODE
141
KPMP
32
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4462
hg19
728
GRCh38
4
hg18
annotation_type!
chromatin state
target gene predictions
organ_slims!
kidney
tongue
BIOSAMPLE
TYPE
5183 results
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table-tab-icon
Clear Filters
candidate regulatory elements
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
A549
21
1
1
2
EndoC_BH1
1
8
1
8
1
3
breast cancer cell
11
9
MCF-7
9
2
1
3
H1-hESC
1
1
1
2
8
+ See 743 more…
primary cell
monocyte
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
30
4
3
endothelial cell
3
1
15
2
9
1
2
2
hepatocyte
2
4
8
1
13
2
fibroblast
3
16
1
2
6
+ See 370 more…
tissue
heart
37
1
5
1
3
2
stomach
40
1
3
1
1
islet of Langerhans
1
6
2
11
13
1
2
2
2
brain
29
3
2
1
1
2
1
lung
33
1
1
+ See 234 more…
in vitro differentiated cells
neural progenitor cell
5
15
10
7
hematopoietic multipotent progenitor cell
19
1
1
1
1
adipocyte
4
1
4
1
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 112 more…
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