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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1648
candidate regulatory elements
1232
target gene predictions
975
histone modifications
chromatin state
811
binding sites
680
gene expression
666
accessible chromatin
168
eQTL
167
differential activity
139
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2571
February, 2021
1658
September, 2022
382
May, 2021
373
February, 2024
286
September, 2023
284
June, 2020
150
May, 2020
128
August, 2021
126
March, 2020
103
January, 2022
99
October, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
32
February, 2023
27
March, 2024
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5480
bed bed3+
897
tsv
302
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6549
Homo sapiens
Biosample type
2153
cell line
2108
tissue
1905
primary cell
426
in vitro differentiated cells
3
stem cell
Organ
762
epithelium
572
kidney
394
brain
359
connective tissue
290
musculature of body
242
pancreas
228
lung
224
vasculature
211
intestine
194
heart
194
limb
191
bodily fluid
185
embryo
182
blood
171
blood vessel
159
skin of body
134
liver
132
large intestine
110
extraembryonic component
96
eye
86
stomach
79
adipose tissue
77
uterus
73
bone element
67
artery
66
mammary gland
65
prostate gland
60
small intestine
55
placenta
54
lymph node
54
penis
51
ureter
49
adrenal gland
gonad
37
thymus
35
spinal cord
34
esophagus
28
spleen
22
testis
21
nerve
19
lymphoid tissue
vein
17
ovary
17
thyroid gland
15
lymphatic vessel
15
mouth
15
skeleton
13
pituitary gland
11
breast
11
bronchus
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
6240
AMP
ENCODE
281
KPMP
60
T1D
LungMap
11
community
5
ITG
Genome assembly (visualization)
5617
hg19
665
GRCh38
4
hg18
annotation_type!
chromatin state
award.project!
ENCODE
LungMap
organ_slims!
gonad
vein
BIOSAMPLE
TYPE
6597 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
1
A549
21
19
1
2
1
K562
7
23
1
2
1
EndoC_BH1
1
1
1
8
8
3
1
+ See 762 more…
tissue
heart
37
20
1
1
3
5
2
stomach
40
21
1
1
3
1
kidney
29
14
2
1
7
10
1
1
brain
29
16
3
1
1
2
2
1
lung
33
17
1
1
+ See 257 more…
primary cell
monocyte
2
86
1
15
18
4
2
1
1
CD8-positive, alpha-beta T cell
7
4
30
3
3
common myeloid progenitor, CD34-positive
27
14
hepatocyte
1
2
4
1
13
7
2
B cell
14
10
2
2
+ See 377 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
7
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 121 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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