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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1246target gene predictions
  • 977histone modifications
  • chromatin state
  • 817binding sites
  • 691accessible chromatin
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2590February, 2021
  • 1678September, 2022
  • 384May, 2021
  • 373February, 2024
  • 289June, 2020
  • 286September, 2023
  • 152May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 83January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 15May, 2022
  • 13November, 2019
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5711bed bed3+
  • 3576tsv
  • 322bigWig
  • 108txt
  • 26csv
  • 16bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9343Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 966ENCODE
  • 636DGA
  • 421T1D
  • 281KPMP
  • 200AMP
  • 185BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 71T2DKP
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4812tissue
  • 2161cell line
  • 1987primary cell
  • 426in vitro differentiated cells
  • 3stem cell
Organ
  • 2874vasculature
  • 2832bodily fluid
  • 2823blood
  • 2817blood vessel
  • 2653vein
  • 778epithelium
  • 572kidney
  • 395brain
  • 382connective tissue
  • 295musculature of body
  • 242pancreas
  • 231lung
  • 211intestine
  • 196heart
  • 194limb
  • 185embryo
  • 159skin of body
  • 141liver
  • 132large intestine
  • 110extraembryonic component
  • 96eye
  • 89adipose tissue
  • 86stomach
  • 77uterus
  • 73bone element
  • 71artery
  • 66mammary gland
  • 65prostate gland
  • 60small intestine
  • 55placenta
  • 54lymph node
  • 54penis
  • 51ureter
  • 49adrenal gland
  • 40gonad
  • 37thymus
  • 35spinal cord
  • 34esophagus
  • 28spleen
  • 22testis
  • 21nerve
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 17ovary
  • 17thyroid gland
  • 15mouth
  • 15skeleton
  • 13pituitary gland
  • 12bronchus
  • 11breast
  • 10bone marrow
  • 8tongue
  • 8urinary bladder
  • 8vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 9013AMP
  • ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5725hg19
  • 707GRCh38
  • 4hg18
annotation_type!
  • chromatin state
award.project!
  • ENCODE
BIOSAMPLE
TYPE

9391 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372011532
stomach40211311
kidney29142110711
brain2916312121
cell line
HeLa-S35551
H1-hESC1391218
A5492119121
K562723121
EndoC_BH11118831
primary cell
monocyte286118154121
CD8-positive, alpha-beta T cell743033
common myeloid progenitor, CD34-positive2714
B cell171032
hepatocyte22417132
in vitro differentiated cells
neural progenitor cell5515107
hematopoietic multipotent progenitor cell19101111
adipocyte461141
cardiomyocytes11
embryonic stem cell1116
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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