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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1661
candidate regulatory elements
1160
target gene predictions
974
histone modifications
813
binding sites
630
accessible chromatin
123
variant allelic effects
chromatin state
11
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
1
sQTL
Date released
2399
February, 2021
1668
September, 2022
285
June, 2020
283
May, 2021
236
February, 2024
135
May, 2020
98
October, 2022
66
January, 2020
51
August, 2021
45
March, 2020
41
November, 2022
30
February, 2023
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5393
bed bed3+
615
tsv
275
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5348
Homo sapiens
Biosample type
2058
cell line
1816
tissue
1175
primary cell
340
in vitro differentiated cells
3
stem cell
Organ
390
epithelium
306
kidney
303
brain
267
connective tissue
267
musculature of body
226
lung
205
intestine
188
bodily fluid
179
blood
175
embryo
175
limb
158
heart
154
skin of body
153
vasculature
128
large intestine
117
blood vessel
117
pancreas
109
extraembryonic component
94
eye
94
liver
83
stomach
uterus
67
bone element
66
mammary gland
63
prostate gland
59
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
47
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
16
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
11
bronchus
11
pituitary gland
10
lymphatic vessel
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
nose
Project
5393
AMP
331
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5387
hg19
408
GRCh38
1
hg18
annotation_type!
chromatin state
organ_slims!
nose
uterus
BIOSAMPLE
TYPE
5393 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
caQTL
eQTL
hQTL
meQTL
other
variant to gene
pQTL
sQTL
cell line
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
+ See 757 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
+ See 212 more…
primary cell
monocyte
1
86
1
17
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 252 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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