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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1616
candidate regulatory elements
1186
target gene predictions
970
histone modifications
chromatin state
808
binding sites
585
accessible chromatin
510
gene expression
163
eQTL
137
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2551
February, 2021
1620
September, 2022
382
May, 2021
371
February, 2024
280
June, 2020
150
May, 2020
127
March, 2020
123
August, 2021
104
January, 2022
96
October, 2022
81
January, 2020
62
February, 2020
61
March, 2023
29
March, 2024
22
November, 2022
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
7
February, 2023
5
September, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5307
bed bed3+
614
tsv
243
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6083
Homo sapiens
Biosample type
2141
cell line
2008
tissue
1557
primary cell
420
in vitro differentiated cells
3
stem cell
Organ
585
epithelium
432
kidney
394
brain
336
connective tissue
290
musculature of body
228
lung
220
pancreas
211
intestine
194
heart
194
limb
191
bodily fluid
189
vasculature
185
embryo
182
blood
159
skin of body
151
blood vessel
134
liver
132
large intestine
110
extraembryonic component
eye
86
stomach
79
adipose tissue
77
uterus
71
bone element
66
mammary gland
65
prostate gland
62
artery
60
small intestine
placenta
54
lymph node
54
penis
51
ureter
49
adrenal gland
40
gonad
37
thymus
35
spinal cord
34
esophagus
28
spleen
22
testis
21
nerve
19
lymphoid tissue
18
vein
ovary
17
thyroid gland
15
mouth
15
skeleton
13
pituitary gland
11
breast
11
bronchus
10
lymphatic vessel
8
bone marrow
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
6130
AMP
325
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5442
hg19
661
GRCh38
4
hg18
annotation_type!
chromatin state
organ_slims!
eye
ovary
placenta
BIOSAMPLE
TYPE
6130 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
1
8
A549
21
19
1
2
1
K562
7
23
1
2
1
EndoC_BH1
1
1
1
8
8
1
1
+ See 760 more…
tissue
heart
37
20
1
1
5
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
1
10
7
1
1
brain
29
16
3
1
2
1
2
1
lung
33
17
1
1
+ See 253 more…
primary cell
monocyte
1
86
1
17
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
3
common myeloid progenitor, CD34-positive
27
14
hepatocyte
1
2
4
1
7
13
2
B cell
14
10
2
2
+ See 313 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
4
1
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 120 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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