Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1382candidate regulatory elements
  • 958target gene predictions
  • chromatin state
  • 750accessible chromatin
  • 668gene expression
  • 393histone modifications
  • 179eQTL
  • 174binding sites
  • 162differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1315September, 2022
  • 1286February, 2021
  • 333November, 2021
  • 321May, 2021
  • 286September, 2023
  • 205February, 2024
  • 150May, 2020
  • 137June, 2020
  • 121March, 2020
  • 119August, 2021
  • 96January, 2022
  • 82January, 2020
  • 64February, 2020
  • 61March, 2023
  • 56January, 2021
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 31February, 2023
  • 31October, 2022
  • 29March, 2024
  • 19April, 2020
  • 15May, 2022
  • 12November, 2019
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3914bed bed3+
  • 3554tsv
  • 540bigWig
  • 108txt
  • 26csv
  • 16bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 7515Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1308EpiMap
  • 750ENCODE
  • 575DGA
  • 542ChIP-Atlas
  • 520AMP
  • 403T2DKP
  • 396T1D
  • 281KPMP
  • 185BLUEPRINT
  • 156 T2DKP
  • 150GTEx
  • 101T2D
  • 91eQTLCatalogue
  • 88CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 64DN
Biosample type
  • 4812tissue
  • 2320primary cell
  • cell line
  • 426in vitro differentiated cells
  • 3stem cell
Organ
  • 2869vasculature
  • 2814blood vessel
  • 2654bodily fluid
  • 2653blood
  • 2651vein
  • 863epithelium
  • 541kidney
  • 404connective tissue
  • 329brain
  • 292musculature of body
  • 229pancreas
  • 200intestine
  • 197heart
  • 188limb
  • 167lung
  • 122liver
  • 113skin of body
  • 111extraembryonic component
  • 108large intestine
  • 95stomach
  • 91eye
  • 86adipose tissue
  • 70embryo
  • 67artery
  • 64small intestine
  • 59adrenal gland
  • 55placenta
  • 51ureter
  • 43mammary gland
  • 43penis
  • 38esophagus
  • 38thymus
  • 36gonad
  • 32spinal cord
  • 31bone element
  • 28spleen
  • 21nerve
  • 21prostate gland
  • 20lymphatic vessel
  • 19ovary
  • 19thyroid gland
  • 17uterus
  • 16testis
  • 15skeleton
  • 14bronchus
  • 14lymphoid tissue
  • 12mouth
  • 11bone marrow
  • 11breast
  • 8tongue
  • 8urinary bladder
  • 8vagina
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 6861AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 5ITG
  • 4community
Genome assembly (visualization)
  • 3939hg19
  • 854GRCh38
  • 3hg18
annotation_type!
  • chromatin state
biosample_type!
  • cell line
BIOSAMPLE
TYPE

7563 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
histone modifications
eQTL
binding sites
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372053112
stomach40213111
kidney29141072111
brain2916213211
primary cell
monocyte218158641121
CD8-positive, alpha-beta T cell754330
endothelial cell3715911222
common myeloid progenitor, CD34-positive2714
B cell171062
in vitro differentiated cells
neural progenitor cell5510715
hematopoietic multipotent progenitor cell19101111
adipocyte464111
cardiomyocytes11
embryonic stem cell1611
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego