Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
18
target gene predictions
16
accessible chromatin
11
candidate regulatory elements
5
binding sites
chromatin state
5
histone modifications
3
variant allelic effects
Date released
19
November, 2021
15
February, 2021
10
September, 2022
6
February, 2024
5
June, 2020
2
May, 2021
1
October, 2022
Available data
58
bed bed3+
11
bigWig
Organism
58
Homo sapiens
Biosample type
tissue
35
cell line
23
primary cell
Organ
849
epithelium
335
connective tissue
335
kidney
187
bodily fluid
179
blood
168
vasculature
160
pancreas
159
embryo
147
skin of body
108
blood vessel
102
brain
102
lung
93
liver
70
mammary gland
67
uterus
63
musculature of body
55
bone element
54
lymph node
53
intestine
52
penis
52
prostate gland
40
heart
38
extraembryonic component
36
large intestine
35
eye
31
artery
22
lymphatic vessel
17
vein
14
bronchus
11
adrenal gland
11
bone marrow
11
placenta
11
stomach
10
gonad
10
pituitary gland
9
esophagus
7
limb
7
testis
6
mouth
6
spinal cord
5
adipose tissue
5
lymphoid tissue
5
trachea
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
39
AMP
19
ENCODE
Genome assembly (visualization)
58
hg19
22
GRCh38
annotation_type!
chromatin state
biosample_type!
tissue
BIOSAMPLE
TYPE
58 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
histone modifications
variant allelic effects
cell line
HT-29
2
1
2
1
1
SW480
1
1
2
1
1
GM18507
2
1
1
1
HCT116
3
2
HCT-116 cell
1
1
2
+ See 4 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
enterocyte of epithelium of small intestine
1
1
paneth cell
1
1
+ See 2 more…
See all biosamples
Download