Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • chromatin state
  • 689gene expression
  • 172differential activity
  • 84Fine-mapped variants
  • 56eQTL
  • 17variant allelic effects
  • 10accessible chromatin
  • 6sQTL
  • 2hQTL
  • 2variant to gene
  • 1histone modifications
  • 1meQTL
  • 1other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 281September, 2023
  • 178February, 2021
  • 99May, 2021
  • 85February, 2024
  • 83March, 2020
  • 70March, 2023
  • 62February, 2020
  • 59August, 2021
  • 38March, 2025
  • 30March, 2024
  • 17January, 2020
  • 17May, 2020
  • 9August, 2018
  • 3November, 2022
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1February, 2023
  • 1July, 2020
  • 1June, 2020
  • 1November, 2020
Available data
  • bed bed3+
  • 3576tsv
  • 544bigWig
  • 108txt
  • 26csv
  • 16bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 3678Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 281KPMP
  • 234DGA
  • 151GTEx
  • 120AMP
  • 103T1D
  • 64 T2DKP
  • 55HPAP
  • 47BLUEPRINT
  • 43STARNET
  • 29ENCODE
  • 23CMDGA
  • 11T2DKP
  • 1ChIP-Atlas
Biosample type
  • 2909tissue
  • 657primary cell
  • 83in vitro differentiated cells
  • 31cell line
Organ
  • 2712vasculature
  • 2695blood vessel
  • 2642blood
  • 2642bodily fluid
  • 2637vein
  • 351epithelium
  • 264kidney
  • 93pancreas
  • 92connective tissue
  • 75brain
  • 40liver
  • 36adipose tissue
  • 33heart
  • 25musculature of body
  • 22artery
  • 17limb
  • 10embryo
  • 6nerve
  • 5lymphatic vessel
  • 5spinal cord
  • 4bone element
  • 3intestine
  • 2esophagus
  • 2gonad
  • 2large intestine
  • 2skin of body
  • 2stomach
  • 2uterus
  • 1adrenal gland
  • 1breast
  • 1eye
  • 1lung
  • 1lymphoid tissue
  • 1mouth
  • 1ovary
  • 1pericardium
  • 1pituitary gland
  • 1prostate gland
  • 1spleen
  • 1testis
  • 1thyroid gland
  • 1tongue
  • 1urinary bladder
  • 1vagina
Project
  • 3382AMP
  • 281KPMP
  • 13community
  • 4ITG
Genome assembly (visualization)
  • 124hg19
  • 105GRCh38
  • 3hg18
annotation_type!
  • chromatin state
files.file_type!
  • bed bed3+
BIOSAMPLE
TYPE

3680 results

search-icontable-tab-icon
Clear Filters
pQTL
gene expression
differential activity
Fine-mapped variants
eQTL
variant allelic effects
accessible chromatin
sQTL
hQTL
variant to gene
histone modifications
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
islet of Langerhans112112
subcutaneous adipose tissue6244
liver2214
kidney7
primary cell
monocyte15111
epithelial cell of proximal tubule16
glomerular endothelial cell141
hepatocyte13
endothelial cell9
in vitro differentiated cells
cardiomyocytes11
extended pluripotent stem (EPS) cells9
induced pluripotent stem cell9
progenitor cell of endocrine pancreas9
neural progenitor cell71
cell line
EndoC_BH183
H1-hESC8
induced pluripotent stem cell7
RCC 7860 HIF1a re-expression1
RCC 7860 HIF2a over-expression1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego