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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
chromatin state
7
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
5
May, 2021
3
February, 2024
3
November, 2021
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
134
bed bed3+
bigWig
2
tsv
Organism
135
Homo sapiens
Biosample type
102
tissue
30
cell line
3
primary cell
Organ
730
epithelium
540
kidney
373
brain
365
connective tissue
285
musculature of body
231
lung
219
intestine
206
vasculature
203
pancreas
191
bodily fluid
185
embryo
185
heart
182
blood
180
limb
164
skin of body
154
blood vessel
135
large intestine
118
liver
110
extraembryonic component
90
stomach
78
uterus
74
adipose tissue
69
mammary gland
65
prostate gland
64
bone element
64
eye
62
small intestine
59
artery
55
placenta
54
lymph node
54
penis
53
adrenal gland
48
ureter
41
gonad
37
thymus
36
esophagus
35
spinal cord
27
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
17
vein
15
mouth
13
pituitary gland
12
bronchus
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
132
AMP
3
ENCODE
Genome assembly (visualization)
131
hg19
7
GRCh38
annotation_type!
chromatin state
files.file_type!
bed bed9+
bigWig
BIOSAMPLE
TYPE
135 results
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candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
mucosa of rectum
4
2
+ See 7 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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