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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1236accessible chromatin
  • 977histone modifications
  • chromatin state
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2590February, 2021
  • 1984July, 2026
  • 1678September, 2022
  • 384May, 2021
  • 368February, 2024
  • 333November, 2021
  • 320May, 2026
  • 289June, 2020
  • 286September, 2023
  • 152May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 83January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 44November, 2022
  • 40May, 2024
  • 32February, 2023
  • 30March, 2024
  • 21July, 2025
  • 19April, 2020
  • 15May, 2022
  • 13November, 2019
  • 9August, 2018
  • 9October, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 8028bed bed3+
  • 3551tsv
  • 544bigWig
  • 112txt
  • 26csv
  • 16bigBed narrowPeak
  • 12bed bed3
  • bed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 11959Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 1458ENCODE-rE2G
  • 966ENCODE
  • 636DGA
  • 533AMP
  • 421T1D
  • 404T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 185BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5440tissue
  • 3724primary cell
  • 2368cell line
  • 470in vitro differentiated cells
  • 3stem cell
Organ
  • 3340blood
  • 2869vasculature
  • 2833blood vessel
  • 2826bodily fluid
  • 2654vein
  • 898epithelium
  • 831brain
  • 679kidney
  • 469connective tissue
  • 437heart
  • 369lung
  • 308musculature of body
  • 302pancreas
  • 299intestine
  • 261skin of body
  • 223liver
  • 194limb
  • 190large intestine
  • 187embryo
  • 152eye
  • 141extraembryonic component
  • 132adipose tissue
  • 116stomach
  • 111muscle organ
  • 91bone element
  • 89mammary gland
  • 89uterus
  • 88adrenal gland
  • 82thymus
  • 81placenta
  • 80artery
  • 77small intestine
  • 74prostate gland
  • 60__MARKER__
  • 60ureter
  • 57spleen
  • 56gonad
  • 54lymph node
  • 54penis
  • 43thyroid gland
  • 41esophagus
  • 41spinal cord
  • 28ovary
  • 27testis
  • 21nerve
  • 21skeleton
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 17mouth
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 11urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11292AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6058hg19
  • 3024GRCh38
  • 4hg18
annotation_type!
  • chromatin state
files.file_type!
  • bed narrowPeak
BIOSAMPLE
TYPE

12007 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3837511412
stomach42403111
head of caudate nucleus86
kidney28291021711
primary cell
monocyte2188611544121
fibroblast2834011026
endothelial cell1732312925223
CD8-positive, alpha-beta T cell2774303
macrophage13321217832
cell line
HeLa-S35951
A5493321112
H1-hESC3911128
K562307112
MCF-7139123
in vitro differentiated cells
hematopoietic multipotent progenitor cell22191111
neural progenitor cell6510157
adipocyte744111
cardiomyocytes11
mesenchymal stem cell43111
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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