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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1697
candidate regulatory elements
1296
target gene predictions
973
histone modifications
897
accessible chromatin
811
binding sites
123
variant allelic effects
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2394
February, 2021
1666
September, 2022
329
November, 2021
285
June, 2020
283
May, 2021
236
February, 2024
135
May, 2020
100
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
39
May, 2024
31
February, 2023
18
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5832
bed bed3+
898
tsv
541
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5786
Homo sapiens
Biosample type
2058
cell line
1817
tissue
1609
primary cell
343
in vitro differentiated cells
3
stem cell
Organ
554
epithelium
331
connective tissue
309
kidney
303
brain
278
musculature of body
238
lung
224
intestine
188
bodily fluid
179
blood
177
embryo
175
limb
170
heart
165
vasculature
164
skin of body
155
pancreas
134
large intestine
122
blood vessel
112
extraembryonic component
101
liver
98
eye
92
stomach
uterus
72
mammary gland
70
bone element
63
prostate gland
63
small intestine
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
47
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
16
vein
15
skeleton
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5424
AMP
329
ENCODE
60
T1D
18
LungMap
1
ITG
Genome assembly (visualization)
5824
hg19
779
GRCh38
1
hg18
annotation_type!
chromatin state
organ_slims!
bronchus
uterus
BIOSAMPLE
TYPE
5832 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
MCF-7
9
6
2
1
3
breast cancer cell
11
9
+ See 757 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 212 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
2
1
+ See 325 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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