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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
116
candidate regulatory elements
92
target gene predictions
chromatin state
52
binding sites
30
histone modifications
22
accessible chromatin
4
eQTL
3
gene expression
1
pQTL
Date released
120
February, 2021
115
September, 2022
31
February, 2024
20
October, 2022
19
June, 2020
May, 2021
6
November, 2021
3
August, 2021
3
March, 2024
2
January, 2022
1
March, 2020
Available data
313
bed bed3+
3
bigWig
3
tsv
Organism
320
Homo sapiens
Biosample type
202
cell line
103
tissue
15
primary cell
Organ
862
epithelium
575
kidney
396
connective tissue
383
brain
295
musculature of body
236
lung
230
vasculature
227
pancreas
224
intestine
200
heart
191
limb
187
bodily fluid
180
embryo
178
blood
173
blood vessel
164
skin of body
136
liver
133
large intestine
110
extraembryonic component
100
eye
93
stomach
77
uterus
76
adipose tissue
74
bone element
70
mammary gland
65
artery
63
prostate gland
small intestine
57
adrenal gland
56
placenta
53
lymph node
53
penis
51
ureter
41
gonad
38
esophagus
37
thymus
34
spinal cord
27
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
18
ovary
18
thyroid gland
17
vein
15
mouth
15
skeleton
14
bronchus
11
bone marrow
10
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
314
AMP
6
ENCODE
Genome assembly (visualization)
315
hg19
38
GRCh38
annotation_type!
chromatin state
month_released!
May, 2021
organ_slims!
small intestine
BIOSAMPLE
TYPE
320 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
7
22
2
1
1
GM12878
2
7
2
1
1
GM06990
2
1
2
1
1
GM19240
1
2
2
1
1
HL-60
2
1
2
1
1
+ See 34 more…
tissue
large intestine
27
13
1
1
sigmoid colon
10
6
1
transverse colon
8
4
1
1
colonic mucosa
4
2
1
mucosa of rectum
4
2
+ See 10 more…
primary cell
colon epithelial cell
3
3
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
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