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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
74
candidate regulatory elements
41
target gene predictions
chromatin state
11
accessible chromatin
6
binding sites
5
histone modifications
3
eQTL
3
gene expression
Date released
69
September, 2022
49
February, 2021
8
June, 2020
May, 2021
6
November, 2021
3
February, 2024
3
January, 2022
3
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
3
bigWig
3
tsv
Organism
143
Homo sapiens
Biosample type
109
tissue
28
cell line
6
primary cell
Organ
862
epithelium
575
kidney
396
connective tissue
383
brain
295
musculature of body
236
lung
230
vasculature
227
pancreas
224
intestine
200
heart
191
limb
187
bodily fluid
180
embryo
178
blood
173
blood vessel
164
skin of body
136
liver
133
large intestine
110
extraembryonic component
100
eye
93
stomach
77
uterus
76
adipose tissue
74
bone element
70
mammary gland
65
artery
63
prostate gland
63
small intestine
57
adrenal gland
56
placenta
53
lymph node
penis
51
ureter
41
gonad
38
esophagus
37
thymus
34
spinal cord
27
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
18
ovary
18
thyroid gland
17
vein
15
mouth
15
skeleton
14
bronchus
11
bone marrow
10
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
137
AMP
6
ENCODE
Genome assembly (visualization)
137
hg19
11
GRCh38
annotation_type!
chromatin state
month_released!
May, 2021
organ_slims!
penis
BIOSAMPLE
TYPE
143 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
13
1
1
sigmoid colon
10
6
1
transverse colon
8
4
1
1
breast epithelium
5
2
1
colonic mucosa
4
2
1
+ See 10 more…
cell line
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
RKO
1
1
1
1
HCT-116 cell
1
2
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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