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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
72
candidate regulatory elements
47
target gene predictions
chromatin state
11
accessible chromatin
6
binding sites
5
histone modifications
3
gene expression
2
eQTL
Date released
69
September, 2022
47
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
3
February, 2024
3
March, 2024
2
January, 2022
2
March, 2020
1
October, 2022
Available data
141
bed bed3+
3
bigWig
3
tsv
Organism
146
Homo sapiens
Biosample type
110
tissue
30
cell line
6
primary cell
Organ
901
epithelium
575
kidney
419
connective tissue
394
brain
301
musculature of body
254
pancreas
240
lung
236
vasculature
230
intestine
205
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
141
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
lymphatic vessel
22
testis
21
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
140
AMP
6
ENCODE
Genome assembly (visualization)
141
hg19
10
GRCh38
annotation_type!
chromatin state
month_released!
October, 2019
BIOSAMPLE
TYPE
146 results
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candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
mucosa of rectum
4
2
+ See 10 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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