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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1537
candidate regulatory elements
1272
target gene predictions
966
histone modifications
chromatin state
851
accessible chromatin
804
binding sites
475
gene expression
162
eQTL
120
variant allelic effects
111
differential activity
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2385
February, 2021
1509
September, 2022
382
May, 2021
372
February, 2024
330
November, 2021
270
June, 2020
146
September, 2023
129
May, 2020
119
March, 2020
102
January, 2022
100
August, 2021
98
October, 2022
70
March, 2023
65
January, 2020
56
January, 2021
51
February, 2020
44
November, 2022
41
May, 2024
29
February, 2023
27
March, 2024
19
April, 2020
15
May, 2022
11
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5560
bed bed3+
637
tsv
501
bigWig
24
csv
21
txt
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6353
Homo sapiens
Biosample type
2123
cell line
1991
primary cell
1857
tissue
425
in vitro differentiated cells
3
stem cell
Organ
906
epithelium
kidney
420
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
236
vasculature
230
intestine
206
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
141
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
lymphatic vessel
22
testis
21
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5835
AMP
330
ENCODE
141
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5690
hg19
993
GRCh38
4
hg18
annotation_type!
chromatin state
organ_slims!
artery
kidney
tongue
BIOSAMPLE
TYPE
6401 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
1
3
+ See 751 more…
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
endothelial cell
3
7
1
15
2
9
1
2
2
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
2
+ See 373 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 235 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 120 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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