Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 11accessible chromatin
  • 11candidate regulatory elements
  • 10gene expression
  • 9target gene predictions
  • chromatin state
  • 7Fine-mapped variants
  • 7eQTL
  • 6binding sites
  • 5histone modifications
  • 4differential activity
  • 4variant allelic effects
  • 2caQTL
Date released
  • 15February, 2021
  • 15September, 2022
  • 6March, 2020
  • 5October, 2025
  • 5September, 2023
  • 4February, 2020
  • 4January, 2020
  • 4March, 2025
  • 4May, 2020
  • 3February, 2023
  • 3January, 2022
  • 3June, 2020
  • 2May, 2021
  • 2November, 2019
  • 1October, 2022
Available data
  • 49bed bed3+
  • 20tsv
  • 8bigWig
Organism
  • 76Homo sapiens
Collection Tags
  • 12ChIP-Atlas
  • 12EpiMap
  • 10GTEx
  • 9STARNET
  • 8ENCODE
  • 7DGA
  • 5KPMP
  • 3AMP
  • 3CMDGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
Biosample type
  • 45tissue
  • 27primary cell
  • 4cell line
Organ
  • 2885vasculature
  • 2832bodily fluid
  • 2825blood vessel
  • 2823blood
  • 2653vein
  • 908epithelium
  • 575kidney
  • 439connective tissue
  • 395brain
  • 323musculature of body
  • 260pancreas
  • 240lung
  • 230intestine
  • 206heart
  • 194limb
  • 187embryo
  • 169skin of body
  • 151liver
  • 138large intestine
  • 113extraembryonic component
  • 100eye
  • 95stomach
  • 94adipose tissue
  • 79uterus
  • 76artery
  • 74bone element
  • 72mammary gland
  • 65prostate gland
  • 64small intestine
  • 59adrenal gland
  • 57placenta
  • 54lymph node
  • 54penis
  • 51ureter
  • 42gonad
  • 38esophagus
  • 38thymus
  • 35spinal cord
  • 28spleen
  • 22lymphatic vessel
  • 22testis
  • 21nerve
  • 19lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 15mouth
  • 15skeleton
  • 14bronchus
  • 13pituitary gland
  • 11bone marrow
  • 11breast
  • 8tongue
  • 8urinary bladder
  • 8vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 71AMP
  • 5KPMP
Genome assembly (visualization)
  • 52hg19
  • 21GRCh38
annotation_type!
  • chromatin state
BIOSAMPLE
TYPE

76 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
Fine-mapped variants
eQTL
binding sites
histone modifications
differential activity
variant allelic effects
caQTL
tissue
coronary artery33133221
tibial artery3312322
artery1112
internal thoracic artery112
abdominal aorta artery1
primary cell
fibroblast of pulmonary artery12121
pulmonary artery endothelial cell12111
Afferent / Efferent Arteriole Endothelial Cell32
aortic endothelial cell211
smooth muscle cell of the coronary artery111
cell line
smooth muscle cell of the coronary artery1111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego