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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
222
accessible chromatin
131
target gene predictions
123
candidate regulatory elements
92
differential activity
chromatin state
43
binding sites
41
variant allelic effects
29
histone modifications
3
eQTL
2
caQTL
Date released
210
February, 2021
155
September, 2023
127
November, 2021
119
September, 2022
77
February, 2024
38
March, 2023
34
May, 2021
27
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
12
February, 2023
12
January, 2020
10
May, 2024
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
587
bed bed3+
325
tsv
184
bigWig
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
940
Homo sapiens
Biosample type
782
primary cell
86
tissue
47
cell line
25
in vitro differentiated cells
Organ
906
epithelium
575
kidney
420
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
236
vasculature
230
intestine
206
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
141
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
lymphatic vessel
22
testis
21
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
629
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
590
hg19
203
GRCh38
annotation_type!
chromatin state
BIOSAMPLE
TYPE
940 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
3
2
2
1
1
2
hepatocyte
13
8
3
2
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
pancreatic ductal cell
3
6
3
3
1
1
2
+ See 146 more…
tissue
pigmented layer of retina
20
Peyer's patch
1
3
7
breast epithelium
1
3
5
esophagus squamous epithelium
1
2
6
femur
1
2
+ See 29 more…
cell line
EndoC_BH1
8
8
1
3
1
GM18507
1
2
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
1
2
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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