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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
120
candidate regulatory elements
74
target gene predictions
chromatin state
18
accessible chromatin
6
binding sites
6
histone modifications
4
gene expression
3
eQTL
2
variant allelic effects
Date released
111
September, 2022
75
February, 2021
15
November, 2021
10
June, 2020
7
May, 2021
5
February, 2024
4
March, 2024
3
January, 2022
2
March, 2020
1
October, 2022
Available data
226
bed bed3+
8
bigWig
4
tsv
Organism
233
Homo sapiens
Biosample type
186
tissue
30
cell line
17
primary cell
Organ
896
epithelium
575
kidney
412
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
218
AMP
15
ENCODE
Genome assembly (visualization)
226
hg19
20
GRCh38
annotation_type!
chromatin state
organ_slims!
blood vessel
mouth
BIOSAMPLE
TYPE
233 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
stomach
40
21
3
1
1
1
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
+ See 13 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
parietal cell
1
1
1
peptic cell
1
1
1
foveolar cell of stomach
1
1
stomach neuroendocrine cell
1
1
+ See 1 more…
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