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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
23
gene expression
21
accessible chromatin
20
target gene predictions
chromatin state
12
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
30
September, 2022
29
February, 2024
22
February, 2021
10
August, 2021
10
March, 2020
4
June, 2020
4
March, 2023
4
November, 2021
3
May, 2021
2
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
May, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
92
bed bed3+
27
tsv
21
bigWig
3
csv
Organism
130
Homo sapiens
Biosample type
54
primary cell
48
tissue
22
cell line
6
in vitro differentiated cells
Organ
906
epithelium
575
kidney
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
236
vasculature
230
intestine
206
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
141
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
lymphatic vessel
22
testis
21
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
126
AMP
4
ENCODE
Genome assembly (visualization)
100
hg19
45
GRCh38
2
hg18
annotation_type!
chromatin state
organ_slims!
connective tissue
penis
BIOSAMPLE
TYPE
130 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
primary cell
hepatocyte
2
13
8
3
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
13
1
4
10
1
2
7
1
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
2
3
3
5
HuH-7
1
1
1
1
1
HuH-7.5
1
1
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
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