Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
189
target gene predictions
131
candidate regulatory elements
chromatin state
33
accessible chromatin
9
binding sites
4
histone modifications
1
eQTL
1
gene expression
1
variant allelic effects
Date released
140
September, 2022
129
July, 2026
70
February, 2021
9
November, 2021
6
June, 2020
4
May, 2021
4
October, 2022
3
April, 2020
1
February, 2024
1
January, 2022
1
March, 2020
1
March, 2024
Available data
368
bed bed3+
9
bigWig
1
tsv
Organism
369
Homo sapiens
Collection Tags
140
EpiMap
93
ENCODE-rE2G
65
ENCODE
36
HDMA
15
ChIP-Atlas
9
AMP
9
T2DKP
6
DGA
1
GTEx
1
T1D
1
T2D
1
eQTLCatalogue
Biosample type
190
tissue
106
cell line
73
primary cell
Organ
3340
blood
2869
vasculature
2833
blood vessel
2826
bodily fluid
2654
vein
899
epithelium
831
brain
679
kidney
470
connective tissue
437
heart
369
lung
312
musculature of body
302
pancreas
299
intestine
261
skin of body
223
liver
194
limb
190
large intestine
187
embryo
152
eye
141
extraembryonic component
132
adipose tissue
116
stomach
111
muscle organ
91
bone element
89
mammary gland
89
uterus
88
adrenal gland
82
thymus
81
placenta
80
artery
77
small intestine
74
prostate gland
60
__MARKER__
60
ureter
57
spleen
56
gonad
54
lymph node
54
penis
43
thyroid gland
41
esophagus
41
spinal cord
28
ovary
27
testis
21
nerve
21
skeleton
19
lymphatic vessel
19
lymphoid tissue
17
mouth
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
11
urinary bladder
10
tongue
10
vagina
5
trachea
3
nose
1
embryonic structure
1
gallbladder
1
pericardium
Project
357
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
238
hg19
139
GRCh38
annotation_type!
chromatin state
BIOSAMPLE
TYPE
369 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
lung
31
33
1
1
left lung
28
26
right lung
22
22
1
upper lobe of left lung
10
7
1
1
1
lower lobe of left lung
3
+ See 2 more…
cell line
A549
33
21
1
2
1
IMR-90
4
2
1
2
1
PC-9
4
2
1
1
1
WI38
3
5
H9
7
+ See 7 more…
primary cell
fibroblast of lung
6
6
2
progenitor cell
5
5
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
3
fibroblast
2
2
+ See 15 more…
See all biosamples
Download