Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 146candidate regulatory elements
  • 80target gene predictions
  • chromatin state
  • 27accessible chromatin
  • 12gene expression
  • 9eQTL
  • 7Fine-mapped variants
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 2caQTL
  • 2differential activity
Date released
  • 136September, 2022
  • 92February, 2021
  • 15February, 2024
  • 11November, 2021
  • 9March, 2020
  • 6February, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5March, 2025
  • 5May, 2020
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 1August, 2021
  • 1January, 2022
Available data
  • 281bed bed3+
  • 19tsv
  • 16bigWig
Organism
  • 306Homo sapiens
Collection Tags
  • 136EpiMap
  • 79ENCODE
  • 32DGA
  • 30 T2DKP
  • 19ChIP-Atlas
  • 17T2DKP
  • 13AMP
  • 12GTEx
  • 6STARNET
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 243tissue
  • 47primary cell
  • 14cell line
  • 2in vitro differentiated cells
Organ
  • 2880vasculature
  • 2832bodily fluid
  • 2823blood
  • 2820blood vessel
  • 2653vein
  • 905epithelium
  • 575kidney
  • 432connective tissue
  • 395brain
  • 306musculature of body
  • 260pancreas
  • 240lung
  • 230intestine
  • 206heart
  • 194limb
  • 187embryo
  • 169skin of body
  • 146liver
  • 138large intestine
  • 113extraembryonic component
  • 100eye
  • 95stomach
  • 89adipose tissue
  • 79uterus
  • 74bone element
  • 72mammary gland
  • 71artery
  • 65prostate gland
  • 64small intestine
  • 59adrenal gland
  • 57placenta
  • 54lymph node
  • 54penis
  • 51ureter
  • 42gonad
  • 38esophagus
  • 38thymus
  • 35spinal cord
  • 28spleen
  • 22lymphatic vessel
  • 22testis
  • 21nerve
  • 19lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 15mouth
  • 15skeleton
  • 14bronchus
  • 13pituitary gland
  • 11bone marrow
  • 11breast
  • 8tongue
  • 8urinary bladder
  • 8vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 295AMP
  • 11ENCODE
Genome assembly (visualization)
  • 293hg19
  • 25GRCh38
annotation_type!
  • chromatin state
BIOSAMPLE
TYPE

306 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
eQTL
Fine-mapped variants
binding sites
histone modifications
variant allelic effects
caQTL
differential activity
tissue
muscle of arm331611
muscle of leg27142
muscle of back2813
psoas muscle781
gastrocnemius medialis851
primary cell
skeletal muscle satellite cell2252
skeletal muscle fiber522
type I muscle cell13111
type II muscle cell13111
skeletal muscle cell2111
cell line
LHCN-M221111
A67322
SJCRH30211
in vitro differentiated cells
myotube11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego