Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 51candidate regulatory elements
  • 51target gene predictions
  • chromatin state
  • 8accessible chromatin
  • 2gene expression
  • 2variant allelic effects
  • 1eQTL
  • 1histone modifications
Date released
  • 46September, 2022
  • 29February, 2021
  • 21July, 2026
  • 9November, 2021
  • 3June, 2020
  • 2February, 2024
  • 2March, 2024
  • 2May, 2021
  • 1January, 2022
  • 1March, 2020
Available data
  • 114bed bed3+
  • 5bigWig
  • 2tsv
Organism
  • 116Homo sapiens
Collection Tags
  • 46EpiMap
  • 28ENCODE
  • 21ENCODE-rE2G
  • 9AMP
  • 9T2DKP
  • 5DGA
  • 4ChIP-Atlas
  • 2GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 105tissue
  • 11primary cell
Organ
  • 3340blood
  • 2869vasculature
  • 2833blood vessel
  • 2826bodily fluid
  • 2654vein
  • 899epithelium
  • 831brain
  • 679kidney
  • 470connective tissue
  • 437heart
  • 369lung
  • 312musculature of body
  • 302pancreas
  • 299intestine
  • 261skin of body
  • 223liver
  • 194limb
  • 190large intestine
  • 187embryo
  • 152eye
  • 141extraembryonic component
  • 132adipose tissue
  • 116stomach
  • 111muscle organ
  • 91bone element
  • 89mammary gland
  • 89uterus
  • 88adrenal gland
  • 82thymus
  • 81placenta
  • 80artery
  • 77small intestine
  • 74prostate gland
  • 60__MARKER__
  • 60ureter
  • 57spleen
  • 56gonad
  • 54lymph node
  • 54penis
  • 43thyroid gland
  • 41esophagus
  • 41spinal cord
  • 28ovary
  • 27testis
  • 21nerve
  • 21skeleton
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 17mouth
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 11urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 107AMP
  • 9ENCODE
Genome assembly (visualization)
  • 92hg19
  • 31GRCh38
annotation_type!
  • chromatin state
BIOSAMPLE
TYPE

116 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
variant allelic effects
eQTL
histone modifications
tissue
stomach40423111
gastroesophageal sphincter51
stomach smooth muscle42
mucosa of stomach21
esophagus - gastroesophageal junction1
primary cell
parietal cell111
peptic cell111
foveolar cell of stomach11
stomach neuroendocrine cell11
gastric goblet cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego