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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • chromatin state
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 172differential activity
  • 141variant allelic effects
  • 72Fine-mapped variants
  • 60eQTL
  • 13caQTL
  • 5hQTL
  • 4sQTL
  • 3meQTL
  • 3other
  • 2variant to gene
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2589February, 2021
  • 1678September, 2022
  • 384May, 2021
  • 368February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 152May, 2020
  • 128August, 2021
  • 128March, 2020
  • 101October, 2022
  • 83January, 2020
  • 64March, 2023
  • 63February, 2020
  • 56January, 2021
  • 44November, 2022
  • 38May, 2024
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 15May, 2022
  • 13November, 2019
  • 11March, 2025
  • 9August, 2018
  • 9October, 2019
  • 5January, 2022
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5936bed bed3+
  • 3541tsv
  • 544bigWig
  • 108txt
  • 24csv
  • 16bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9528Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 966ENCODE
  • 630DGA
  • 533AMP
  • 404T2DKP
  • 320T1D
  • 281KPMP
  • 185BLUEPRINT
  • 1744DN
  • 168 T2DKP
  • 151GTEx
  • 94CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 16STARNET
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 10T2D
Biosample type
  • 4724tissue
  • 2270primary cell
  • 2151cell line
  • 426in vitro differentiated cells
  • 3stem cell
Organ
  • 2871vasculature
  • 2826bodily fluid
  • 2817blood
  • 2811blood vessel
  • 2653vein
  • 904epithelium
  • 574kidney
  • 415connective tissue
  • 378brain
  • 299musculature of body
  • 250pancreas
  • 239lung
  • 227intestine
  • 203heart
  • 192limb
  • 187embryo
  • 166skin of body
  • 142liver
  • 136large intestine
  • 112extraembryonic component
  • 99eye
  • 94stomach
  • 80adipose tissue
  • 78uterus
  • 74bone element
  • 72mammary gland
  • 65artery
  • 64prostate gland
  • 63small intestine
  • 58adrenal gland
  • 56placenta
  • 54lymph node
  • 54penis
  • 51ureter
  • 39gonad
  • 38thymus
  • 35esophagus
  • 34spinal cord
  • 27spleen
  • 22lymphatic vessel
  • 20nerve
  • 20testis
  • 19lymphoid tissue
  • 18ovary
  • 18thyroid gland
  • 15skeleton
  • 14bronchus
  • 14mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 8tongue
  • 8urinary bladder
  • 7vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 8869AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 9community
  • 5ITG
Genome assembly (visualization)
  • 6052hg19
  • 938GRCh38
  • 4hg18
annotation_type!
  • chromatin state
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

9576 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
meQTL
other
variant to gene
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372015132
stomach4021131
kidney29142101711
brain291632111
primary cell
monocyte286181151211
CD8-positive, alpha-beta T cell753043
common myeloid progenitor, CD34-positive2714
endothelial cell371152922
B cell171062
cell line
HeLa-S35551
H1-hESC1391128
A5492119112
K562723112
EndoC_BH11181831
in vitro differentiated cells
neural progenitor cell5515107
hematopoietic multipotent progenitor cell19101111
adipocyte461411
cardiomyocytes11
embryonic stem cell1161
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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