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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
107
candidate regulatory elements
93
accessible chromatin
93
target gene predictions
61
chromatin state
50
gene expression
39
binding sites
histone modifications
22
eQTL
variant allelic effects
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
159
September, 2022
106
February, 2021
50
November, 2021
25
June, 2020
18
May, 2021
12
October, 2022
11
August, 2021
11
September, 2023
10
January, 2020
9
February, 2020
9
February, 2024
9
March, 2020
7
August, 2017
7
January, 2022
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2023
1
March, 2024
1
May, 2020
Available data
345
bed bed3+
55
bigWig
54
bed bed9
52
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
475
Homo sapiens
Biosample type
257
primary cell
102
tissue
71
cell line
44
in vitro differentiated cells
1
stem cell
Organ
788
epithelium
574
kidney
405
connective tissue
401
brain
360
musculature of body
306
lung
278
intestine
239
heart
234
limb
227
pancreas
225
vasculature
204
embryo
193
bodily fluid
190
skin of body
183
blood
177
blood vessel
169
large intestine
141
extraembryonic component
134
liver
116
stomach
103
eye
84
small intestine
83
adipose tissue
83
bone element
81
mammary gland
81
uterus
72
adrenal gland
70
placenta
70
prostate gland
64
artery
61
ureter
59
penis
58
lymph node
49
gonad
48
thymus
43
esophagus
43
spinal cord
34
spleen
25
testis
23
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
21
vein
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
405
AMP
50
ENCODE
9
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
415
hg19
136
GRCh38
2
hg18
annotation_type!
differential activity
histone modifications
variant allelic effects
BIOSAMPLE
TYPE
475 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
osteoblast
2
5
2
1
2
3
foreskin fibroblast
6
1
2
1
4
+ See 44 more…
tissue
adipose tissue
7
2
8
6
3
1
4
subcutaneous adipose tissue
2
2
1
5
6
3
omental fat pad
5
2
2
2
2
2
3
prostate gland
4
1
2
2
2
1
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
cell line
22Rv1
4
2
2
1
LNCaP clone FGC
3
2
2
GM23248
2
1
1
1
1
PC-3
2
1
1
1
1
RWPE1
2
1
1
1
1
+ See 16 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
chondrocyte
5
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
+ See 5 more…
stem cell
mesenchymal stem cell
1
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