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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
988
candidate regulatory elements
566
target gene predictions
541
chromatin state
265
accessible chromatin
183
gene expression
183
histone modifications
114
eQTL
74
Fine-mapped variants
74
binding sites
54
variant allelic effects
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
1440
September, 2022
816
February, 2021
113
March, 2020
83
June, 2020
77
August, 2021
68
May, 2021
67
May, 2020
65
January, 2020
58
January, 2022
53
February, 2024
48
February, 2020
35
November, 2022
27
March, 2024
26
February, 2023
23
August, 2017
12
November, 2019
9
May, 2019
8
April, 2019
7
October, 2019
6
March, 2023
4
September, 2023
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
2151
bed bed3+
512
bed bed9
281
tsv
132
bigWig
36
bigBed bed9
24
csv
1
bam
Organism
3053
Homo sapiens
Biosample type
2585
tissue
2347
primary cell
2342
cell line
470
in vitro differentiated cells
4
stem cell
Organ
353
brain
307
musculature of body
302
kidney
236
limb
232
intestine
215
heart
181
lung
143
connective tissue
134
large intestine
117
pancreas
108
stomach
103
extraembryonic component
87
epithelium
85
vasculature
83
adipose tissue
83
blood vessel
80
small intestine
76
eye
65
embryo
64
liver
64
ureter
adrenal gland
60
placenta
48
thymus
42
artery
39
gonad
36
spinal cord
35
esophagus
34
skin of body
34
spleen
25
nerve
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
8
penis
5
mammary gland
4
bodily fluid
4
nose
3
blood
3
pituitary gland
2
lymphatic vessel
1
vein
Project
3050
AMP
5
ITG
Genome assembly (visualization)
2785
hg19
784
GRCh38
3
hg18
annotation_type!
differential activity
organ_slims!
adrenal gland
BIOSAMPLE
TYPE
3055 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
Fine-mapped variants
binding sites
variant allelic effects
variant to gene
pQTL
caQTL
sQTL
other
representative DNase hypersensitivity sites
tissue
heart
37
20
21
5
3
1
1
2
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
7
2
1
1
1
brain
29
16
18
2
1
3
2
1
1
lung
33
17
16
1
1
+ See 259 more…
in vitro differentiated cells
neural progenitor cell
5
5
4
10
7
15
hematopoietic multipotent progenitor cell
19
10
10
1
1
1
1
adipocyte
4
6
6
4
1
1
1
embryonic stem cell
1
5
6
1
1
cardiomyocytes
11
+ See 121 more…
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