Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
106
candidate regulatory elements
69
target gene predictions
55
chromatin state
17
accessible chromatin
10
binding sites
7
histone modifications
5
eQTL
4
gene expression
Date released
155
September, 2022
69
February, 2021
12
June, 2020
9
November, 2021
7
May, 2021
5
January, 2022
4
March, 2024
3
August, 2017
3
February, 2024
3
March, 2020
2
October, 2022
1
May, 2020
Available data
212
bed bed3+
52
bed bed9
5
bigWig
4
tsv
Organism
273
Homo sapiens
Biosample type
221
tissue
41
cell line
11
primary cell
Organ
857
epithelium
596
kidney
466
brain
446
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
264
AMP
9
ENCODE
Genome assembly (visualization)
264
hg19
68
GRCh38
annotation_type!
differential activity
BIOSAMPLE
TYPE
273 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
thymus
20
14
11
1
1
1
sigmoid colon
10
7
5
1
ovary
8
6
4
1
1
1
transverse colon
8
5
4
1
1
+ See 10 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
HCT-116 cell
1
1
2
+ See 5 more…
primary cell
colon epithelial cell
3
3
luteal cell
1
1
Leydig cell
1
fetal thymocyte
1
somatic gonadal cell
1
See all biosamples
Download