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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
109
candidate regulatory elements
97
target gene predictions
77
accessible chromatin
61
chromatin state
51
gene expression
differential activity
19
eQTL
13
binding sites
11
histone modifications
11
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
166
September, 2022
86
February, 2021
39
May, 2021
28
February, 2024
24
November, 2021
20
January, 2021
15
March, 2023
13
June, 2020
13
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
August, 2017
6
May, 2020
6
October, 2019
5
January, 2020
3
February, 2020
2
March, 2024
2
November, 2019
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
Available data
325
bed bed3+
60
bigWig
54
bed bed9
52
tsv
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
461
Homo sapiens
Biosample type
284
tissue
106
primary cell
68
cell line
3
in vitro differentiated cells
Organ
867
epithelium
596
kidney
466
brain
454
connective tissue
374
musculature of body
311
lung
289
intestine
257
heart
251
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
417
AMP
24
ENCODE
20
T1D
Genome assembly (visualization)
397
hg19
117
GRCh38
annotation_type!
differential activity
BIOSAMPLE
TYPE
461 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
13
2
1
1
2
2
2
spinal cord
14
8
1
7
1
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
+ See 20 more…
primary cell
pancreatic ductal cell
3
6
3
1
2
1
pancreatic beta cell
3
8
3
1
pancreatic alpha cell
3
7
3
1
pancreatic acinar cell
3
6
3
1
pancreatic delta cell
4
5
3
1
+ See 13 more…
cell line
EndoC_BH1
1
8
8
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
Panc1
2
2
1
+ See 10 more…
in vitro differentiated cells
pancreatic ductal cell
3
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