Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
794
histone modifications
743
binding sites
727
target gene predictions
655
candidate regulatory elements
571
accessible chromatin
499
gene expression
388
chromatin state
162
differential activity
60
variant allelic effects
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
1760
February, 2021
1029
September, 2022
333
November, 2021
316
May, 2021
314
February, 2024
281
September, 2023
205
June, 2020
99
October, 2022
May, 2020
64
March, 2023
50
August, 2021
47
May, 2022
24
January, 2020
19
April, 2020
16
February, 2020
12
March, 2020
11
August, 2017
9
August, 2018
9
November, 2022
7
October, 2019
5
February, 2023
3
November, 2020
2
January, 2022
2
March, 2024
1
July, 2020
1
June, 2021
1
November, 2019
Available data
3573
bed bed3+
611
tsv
343
bed bed9
340
bigWig
108
txt
34
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
4620
Homo sapiens
Biosample type
2477
tissue
2340
cell line
2280
primary cell
463
in vitro differentiated cells
4
stem cell
Organ
826
epithelium
343
kidney
301
connective tissue
214
bodily fluid
204
blood
172
vasculature
170
skin of body
149
embryo
139
pancreas
130
lung
116
blood vessel
105
brain
88
liver
82
mammary gland
70
uterus
64
bone element
64
musculature of body
63
prostate gland
62
lymph node
57
intestine
56
penis
43
extraembryonic component
40
heart
40
large intestine
33
artery
32
eye
20
vein
19
lymphatic vessel
16
bronchus
13
placenta
11
adrenal gland
11
stomach
10
bone marrow
10
esophagus
10
gonad
10
pituitary gland
8
limb
8
mouth
7
spinal cord
7
testis
6
lymphoid tissue
5
trachea
4
adipose tissue
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
3978
AMP
333
ENCODE
281
KPMP
T1D
19
LungMap
9
community
Genome assembly (visualization)
3964
hg19
1023
GRCh38
1
hg18
annotation_type!
eQTL
award.project!
T1D
month_released!
May, 2020
BIOSAMPLE
TYPE
4620 results
search-icon
table-tab-icon
Clear Filters
histone modifications
binding sites
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
differential activity
variant allelic effects
caQTL
hQTL
meQTL
sQTL
other
cell line
HeLa-S3
1
55
5
3
A549
1
2
19
21
1
18
H1-hESC
1
2
39
1
1
8
1
K562
1
2
23
7
1
7
MCF-7
2
3
6
9
1
5
+ See 764 more…
primary cell
monocyte
86
1
15
15
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
30
3
7
1
3
1
B cell
9
14
4
2
8
endothelial cell
1
2
6
14
9
2
2
+ See 431 more…
See all biosamples
Download