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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
21
candidate regulatory elements
21
gene expression
20
target gene predictions
16
chromatin state
14
histone modifications
13
binding sites
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
43
September, 2022
26
February, 2024
25
February, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
August, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
May, 2022
1
February, 2020
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
98
bed bed3+
24
tsv
23
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
141
Homo sapiens
Biosample type
63
primary cell
50
tissue
28
cell line
in vitro differentiated cells
Organ
920
epithelium
646
kidney
429
brain
389
connective tissue
364
musculature of body
310
lung
286
intestine
259
pancreas
257
vasculature
247
heart
237
limb
216
bodily fluid
205
blood
197
blood vessel
192
skin of body
185
embryo
172
large intestine
141
liver
140
extraembryonic component
stomach
102
eye
89
bone element
84
mammary gland
83
small intestine
82
uterus
77
prostate gland
75
adipose tissue
72
adrenal gland
72
placenta
69
artery
64
ureter
62
lymph node
58
penis
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
19
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
1
pericardium
Project
136
AMP
5
ENCODE
Genome assembly (visualization)
114
hg19
57
GRCh38
1
hg18
annotation_type!
eQTL
biosample_type!
in vitro differentiated cells
month_released!
May, 2019
organ_slims!
stomach
BIOSAMPLE
TYPE
141 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
13
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
13
1
10
9
2
1
1
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
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