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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1680
candidate regulatory elements
1333
target gene predictions
962
histone modifications
878
accessible chromatin
804
binding sites
121
variant allelic effects
74
chromatin state
12
caQTL
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2384
February, 2021
1642
September, 2022
328
November, 2021
286
May, 2021
282
June, 2020
270
February, 2024
136
May, 2020
100
October, 2022
70
January, 2020
56
January, 2021
46
August, 2021
42
March, 2020
41
November, 2022
37
May, 2024
32
August, 2017
31
February, 2023
19
April, 2020
14
October, 2019
13
May, 2022
13
November, 2019
9
May, 2019
8
April, 2019
5
January, 2022
5
September, 2023
2
November, 2020
2
September, 2018
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5840
bed bed3+
853
bed bed9
845
tsv
523
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
21
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5830
Homo sapiens
Biosample type
2100
cell line
1828
tissue
1593
primary cell
349
in vitro differentiated cells
4
stem cell
Organ
557
epithelium
336
connective tissue
315
brain
309
kidney
282
musculature of body
239
lung
228
intestine
190
bodily fluid
185
heart
181
blood
179
limb
178
embryo
174
vasculature
165
skin of body
158
pancreas
137
large intestine
131
blood vessel
112
extraembryonic component
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
48
artery
47
adipose tissue
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
19
vein
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
15
nerve
15
skeleton
14
bronchus
13
mouth
11
bone marrow
11
pituitary gland
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5468
AMP
328
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5869
hg19
836
GRCh38
annotation_type!
eQTL
organ_slims!
breast
liver
BIOSAMPLE
TYPE
5876 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 756 more…
tissue
heart
37
20
1
5
1
2
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
2
brain
29
16
3
2
1
1
2
muscle of arm
33
16
1
1
+ See 213 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
2
+ See 327 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
5
1
5
mesenchymal stem cell
3
3
1
1
1
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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