Annotation Matrix – Common Metabolic Diseases Genome Atlas

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

BIOSAMPLE

	TYPE
7935 results Clear Filters	target gene predictions	candidate regulatory elements	accessible chromatin	histone modifications	binding sites	variant allelic effects	chromatin state	caQTL	hQTL	meQTL	other	pQTL	variant to gene	sQTL
primary cell
monocyte	2		18	86	1				1	1
fibroblast	28	3	40		1	6
CD8-positive, alpha-beta T cell	27	7	4	30
T-cell	64	4
CD4-positive, alpha-beta T cell	52	8	1

tissue
head of caudate nucleus	86
stomach	42	40	3	1
heart	38	37	5	1	1	2
kidney	28	29	10	2	1	1
muscle of arm	33	33	1			1

cell line
HeLa-S3	59	5			1
A549	33	21	1	1	2
H1-hESC	39	1	1	1	2
K562	30	7	1	1	2		1
MCF-7	13	9	1	2	3

in vitro differentiated cells
hematopoietic multipotent progenitor cell	22	19	1	1	1
neural progenitor cell	6	5	10	14
adipocyte	7	4	4	1	1		4
mesenchymal stem cell	4	3	1	1	1
neuronal stem cell	2	2	1	2	2

stem cell
H1-hESC							1
mesenchymal stem cell	1
mesendoderm	1
undifferentiated ESC (H9 cell line)	1