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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1245target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 689gene expression
  • 685accessible chromatin
  • eQTL
  • 172differential activity
  • 88variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2587February, 2021
  • 2511September, 2022
  • 386May, 2021
  • 318February, 2024
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128March, 2020
  • 101August, 2021
  • 101October, 2022
  • 89January, 2020
  • 69March, 2023
  • 56January, 2021
  • 44November, 2022
  • 43May, 2022
  • 38February, 2020
  • 38May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 20March, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4January, 2022
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5558bed bed3+
  • 3531tsv
  • 869bed bed9
  • 324bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10039Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 960ENCODE
  • 576DGA
  • 317T1D
  • 281KPMP
  • 216BLUEPRINT
  • 1744DN
  • 167AMP
  • 151 T2DKP
  • 127GTEx
  • 99CMDGA
  • 67HPAP
  • 47T2DKP
  • 26FNIH_projects-heart
  • 25STARNET
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 10T2D
Biosample type
  • 5194tissue
  • 2342cell line
  • 2074primary cell
  • 470in vitro differentiated cells
  • 4stem cell
Organ
  • 2895vasculature
  • 2855bodily fluid
  • 2844blood
  • 2835blood vessel
  • 2658vein
  • 804epithelium
  • 645kidney
  • 438brain
  • 396connective tissue
  • 358musculature of body
  • 300lung
  • 264intestine
  • 241heart
  • 241pancreas
  • 239limb
  • 213embryo
  • 190skin of body
  • 166large intestine
  • 147liver
  • 142extraembryonic component
  • 107stomach
  • 104eye
  • 88bone element
  • 82adipose tissue
  • 80mammary gland
  • 80uterus
  • 79small intestine
  • 76prostate gland
  • 72artery
  • 70placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 61adrenal gland
  • 48thymus
  • 45gonad
  • 41spinal cord
  • 36esophagus
  • 33spleen
  • 24lymphoid tissue
  • 24testis
  • 23nerve
  • 21lymphatic vessel
  • 20ovary
  • 19thyroid gland
  • 18mouth
  • 18skeleton
  • 13bronchus
  • 12bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9713AMP
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 11community
  • 2ITG
Genome assembly (visualization)
  • 6546hg19
  • 1444GRCh38
  • 1hg18
annotation_type!
  • eQTL
lab.title!
  • Bing Ren, UCSD
BIOSAMPLE
TYPE

10086 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201211352
stomach402111913
kidney291421617101
brain29163181121
cell line
HeLa-S355531
A549211911821
H1-hESC13911281
K5627231721
MCF-7962531
primary cell
monocyte28611518121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7430133
B cell1710823
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
neural progenitor cell55154710
hematopoietic multipotent progenitor cell1910110111
adipocyte4616114
embryonic stem cell11516
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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