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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 971histone modifications
  • 907accessible chromatin
  • 877candidate regulatory elements
  • 817binding sites
  • 689gene expression
  • 523target gene predictions
  • eQTL
  • 172differential activity
  • 141variant allelic effects
  • 111chromatin state
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2587February, 2021
  • September, 2022
  • 386May, 2021
  • 371February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128March, 2020
  • 101August, 2021
  • 101October, 2022
  • 89January, 2020
  • 69March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 38February, 2020
  • 38May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 20March, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5January, 2022
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4273bed bed3+
  • 3531tsv
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 26csv
  • 15bigBed narrowPeak
  • 1bam
Organism
  • 7921Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1847ChIP-Atlas
  • 966ENCODE
  • 635DGA
  • 499AMP
  • 380T2DKP
  • 317T1D
  • 281KPMP
  • 216BLUEPRINT
  • 1744DN
  • 160 T2DKP
  • 127GTEx
  • 99CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 25STARNET
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 7T2D
  • 1EpiMap
Biosample type
  • 3817tissue
  • 1980primary cell
  • 1800cell line
  • 365in vitro differentiated cells
  • 4stem cell
Organ
  • 2828vasculature
  • 2780bodily fluid
  • 2778blood vessel
  • 2775blood
  • 2652vein
  • 804epithelium
  • 423kidney
  • 335connective tissue
  • 258brain
  • 218pancreas
  • 167musculature of body
  • 143heart
  • 134embryo
  • 122intestine
  • 107liver
  • 101limb
  • 100lung
  • 99skin of body
  • 81eye
  • 74large intestine
  • 70uterus
  • 58adipose tissue
  • 51artery
  • 49stomach
  • 47bone element
  • 46extraembryonic component
  • 45mammary gland
  • 38lymph node
  • 38prostate gland
  • 34penis
  • 30adrenal gland
  • 26small intestine
  • 25ureter
  • 24placenta
  • 23gonad
  • 21esophagus
  • 18lymphatic vessel
  • 17spinal cord
  • 16thymus
  • 15spleen
  • 14nerve
  • 12pituitary gland
  • 12testis
  • 10bone marrow
  • 10bronchus
  • 10ovary
  • 10thyroid gland
  • 9lymphoid tissue
  • 9skeleton
  • 6breast
  • 6mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 3vagina
  • 1nose
  • 1pericardium
Project
  • 7262AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 11community
  • 2ITG
Genome assembly (visualization)
  • 4428hg19
  • 944GRCh38
  • 1hg18
annotation_type!
  • eQTL
month_released!
  • September, 2022
BIOSAMPLE
TYPE

7968 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
kidney210151712
heart151813122
islet of Langerhans15211113222
retina1233111
primary cell
monocyte86181152121
CD8-positive, alpha-beta T cell3047351
endothelial cell115329722
hepatocyte48111322
fibroblast163146
cell line
HeLa-S32152
H1-hESC112838
EndoC_BH11818131
K5621112171
breast cancer cell119
in vitro differentiated cells
neural progenitor cell1510171
adipocyte1421144
embryonic stem cell16115
hematopoietic multipotent progenitor cell11911
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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