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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1600candidate regulatory elements
  • 1235target gene predictions
  • 949histone modifications
  • 891chromatin state
  • 774binding sites
  • 701accessible chromatin
  • 436gene expression
  • eQTL
  • 100variant allelic effects
  • 84Fine-mapped variants
  • 80differential activity
  • 11caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2391February, 2021
  • 2360September, 2022
  • 352May, 2021
  • 297February, 2024
  • 264June, 2020
  • 206November, 2021
  • 140May, 2020
  • 131September, 2023
  • 122March, 2020
  • 95October, 2022
  • 78August, 2021
  • 75January, 2020
  • 47May, 2022
  • 36January, 2021
  • 32August, 2017
  • 31March, 2023
  • 30February, 2020
  • 29May, 2024
  • 29November, 2022
  • 28March, 2024
  • 20February, 2023
  • 20March, 2025
  • 13November, 2019
  • 12April, 2020
  • 9May, 2019
  • 9October, 2019
  • 8April, 2019
  • 5January, 2022
  • 3August, 2018
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 5397bed bed3+
  • 3207tsv
  • 819bed bed9
  • 370bigWig
  • 38bigBed bed9
  • 34bed bed9+
  • 30txt
  • 20csv
  • 2bigBed narrowPeak
  • 1bam
Organism
  • 9477Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2355EpiMap
  • 1767ChIP-Atlas
  • 903ENCODE
  • 436DGA
  • 347AMP
  • 282T1D
  • 232T2DKP
  • 216BLUEPRINT
  • 1744DN
  • 126KPMP
  • 125GTEx
  • 114 T2DKP
  • 69CMDGA
  • 25STARNET
  • 23HPAP
  • 20FNIH_projects-heart
  • 12ROADMAP
  • 9FNIH_projects-liver
  • 6T2D
Biosample type
  • 5135tissue
  • 2299cell line
  • 1640primary cell
  • 444in vitro differentiated cells
  • 4stem cell
Organ
  • 2903vasculature
  • 2855bodily fluid
  • 2844blood
  • 2838blood vessel
  • 2658vein
  • epithelium
  • 648kidney
  • 455connective tissue
  • 438brain
  • 371musculature of body
  • 310lung
  • 286intestine
  • 262pancreas
  • 251heart
  • 239limb
  • 215embryo
  • 201skin of body
  • 172large intestine
  • 153liver
  • 145extraembryonic component
  • 118stomach
  • 108eye
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 82adipose tissue
  • 82uterus
  • 77prostate gland
  • 72adrenal gland
  • 72artery
  • 72placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 47gonad
  • 42esophagus
  • 41spinal cord
  • 33spleen
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24testis
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9129AMP
  • 206ENCODE
  • 126KPMP
  • 40T1D
  • 12LungMap
  • 9community
  • 2ITG
Genome assembly (visualization)
  • 6333hg19
  • 1540GRCh38
  • 1hg18
annotation_type!
  • eQTL
organ_slims!
  • epithelium
BIOSAMPLE
TYPE

9524 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
accessible chromatin
gene expression
variant allelic effects
Fine-mapped variants
differential activity
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201211532
stomach402111931
kidney291421611071
brain29163181211
cell line
HeLa-S355531
A549211911821
H1-hESC13911218
K5627231721
MCF-7962531
primary cell
monocyte28611815121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
B cell1710862
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4616141
embryonic stem cell11516
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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