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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
206
accessible chromatin
117
target gene predictions
102
candidate regulatory elements
92
differential activity
49
chromatin state
39
binding sites
38
variant allelic effects
26
histone modifications
eQTL
2
caQTL
Date released
187
February, 2021
155
September, 2023
139
September, 2022
125
November, 2021
73
February, 2024
38
March, 2023
34
May, 2021
23
August, 2021
23
June, 2020
20
January, 2021
15
November, 2022
13
May, 2020
12
February, 2023
12
January, 2020
10
May, 2024
8
February, 2020
6
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
5
October, 2022
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
527
bed bed3+
324
tsv
172
bigWig
78
txt
46
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
924
Homo sapiens
Biosample type
799
primary cell
59
tissue
40
cell line
26
in vitro differentiated cells
Organ
956
epithelium
648
kidney
447
connective tissue
brain
368
musculature of body
310
lung
286
intestine
263
vasculature
262
pancreas
251
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
150
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphatic vessel
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
18
mouth
18
skeleton
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
616
AMP
155
KPMP
125
ENCODE
20
T1D
6
LungMap
2
community
Genome assembly (visualization)
575
hg19
236
GRCh38
annotation_type!
eQTL
organ_slims!
brain
bronchus
BIOSAMPLE
TYPE
924 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
caQTL
primary cell
endothelial cell
9
15
7
3
2
2
1
2
hepatocyte
13
8
3
2
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 140 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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