Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 59candidate regulatory elements
  • 36target gene predictions
  • 33chromatin state
  • 9accessible chromatin
  • 5histone modifications
  • 3binding sites
  • eQTL
Date released
  • 99September, 2022
  • 33February, 2021
  • 6June, 2020
  • 3May, 2021
  • 3November, 2021
  • 1October, 2022
Available data
  • 112bed bed3+
  • 33bed bed9
  • 3bigWig
Organism
  • 145Homo sapiens
Collection Tags
  • 99EpiMap
  • 27ENCODE
  • 13ChIP-Atlas
  • 3AMP
  • 3DGA
  • 3T2DKP
Biosample type
  • 97tissue
  • 40primary cell
  • 5in vitro differentiated cells
  • 3cell line
Organ
  • 2903vasculature
  • 2855bodily fluid
  • 2844blood
  • 2838blood vessel
  • 2658vein
  • 955epithelium
  • 648kidney
  • 455connective tissue
  • 438brain
  • 371musculature of body
  • 310lung
  • 286intestine
  • 262pancreas
  • 251heart
  • 239limb
  • 215embryo
  • 201skin of body
  • 172large intestine
  • 153liver
  • 145extraembryonic component
  • 118stomach
  • 108eye
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 82adipose tissue
  • 82uterus
  • 77prostate gland
  • 72adrenal gland
  • 72artery
  • 72placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 47gonad
  • 42esophagus
  • 41spinal cord
  • 33spleen
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24testis
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 142AMP
  • 3ENCODE
Genome assembly (visualization)
  • 145hg19
  • 36GRCh38
annotation_type!
  • eQTL
BIOSAMPLE
TYPE

145 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
tissue
placenta261514121
chorionic villus844
chorion membrane3331
umbilical cord21111
amnion211
primary cell
trophoblast cell75411
fibroblast of villous mesenchyme211112
amnion mesenchymal stem cell111
amniotic stem cell111
epithelial cell of amnion111
in vitro differentiated cells
trophoblast cell221
cell line
HTR-8/Svneo111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego