Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 202gene expression
  • 159candidate regulatory elements
  • 77chromatin state
  • 75target gene predictions
  • 56differential activity
  • 50accessible chromatin
  • 16variant allelic effects
  • 7binding sites
  • 6histone modifications
  • eQTL
Date released
  • 225September, 2022
  • 188February, 2021
  • 140September, 2023
  • 27August, 2021
  • 19May, 2020
  • 15June, 2020
  • 14January, 2020
  • 8February, 2020
  • 3March, 2020
  • 3November, 2021
  • 2March, 2024
  • 2October, 2022
  • 1April, 2019
  • 1May, 2019
Available data
  • 307bed bed3+
  • 251tsv
  • 87txt
  • 77bed bed9
  • 36bigWig
  • 2bigBed bed9
Organism
  • 648Homo sapiens
Collection Tags
  • 225EpiMap
  • 145DGA
  • 140KPMP
  • 91ENCODE
  • 26ChIP-Atlas
  • 3AMP
  • 3T2DKP
  • 2GTEx
Biosample type
  • 309primary cell
  • 297tissue
  • 41cell line
  • 1in vitro differentiated cells
Organ
  • 2903vasculature
  • 2855bodily fluid
  • 2844blood
  • 2838blood vessel
  • 2658vein
  • 955epithelium
  • 648kidney
  • 455connective tissue
  • 438brain
  • 371musculature of body
  • 310lung
  • 286intestine
  • 262pancreas
  • 251heart
  • 239limb
  • 215embryo
  • 201skin of body
  • 172large intestine
  • 153liver
  • 145extraembryonic component
  • 118stomach
  • 108eye
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 82adipose tissue
  • 82uterus
  • 77prostate gland
  • 72adrenal gland
  • 72artery
  • 72placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 47gonad
  • 42esophagus
  • 41spinal cord
  • 33spleen
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24testis
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 505AMP
  • 140KPMP
  • 3ENCODE
Genome assembly (visualization)
  • 384hg19
  • 104GRCh38
annotation_type!
  • eQTL
BIOSAMPLE
TYPE

648 results

search-icontable-tab-icon
Clear Filters
gene expression
candidate regulatory elements
chromatin state
target gene predictions
differential activity
accessible chromatin
variant allelic effects
binding sites
histone modifications
primary cell
epithelial cell of proximal tubule16211111
glomerular endothelial cell1421121
glomerular visceral epithelial cell52112
kidney tubule cell13222
kidney glomerular epithelial cell121121
tissue
kidney729161410112
right kidney20101011
renal cortex interstitium209911
renal pelvis199921
left kidney1899
cell line
HEK293311121
ACHN2111
Caki22111
RCC 78602111
G401211
in vitro differentiated cells
renal cell carcinoma1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego