Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 94candidate regulatory elements
  • 50chromatin state
  • 49target gene predictions
  • 20accessible chromatin
  • 9Fine-mapped variants
  • 8variant allelic effects
  • eQTL
  • 5gene expression
  • 2binding sites
  • 2histone modifications
Date released
  • 138September, 2022
  • 58February, 2021
  • 10May, 2020
  • 9March, 2020
  • 7January, 2020
  • 6June, 2020
  • 3February, 2020
  • 3May, 2021
  • 2May, 2019
  • 2November, 2019
  • 1March, 2024
Available data
  • 175bed bed3+
  • 50bed bed9
  • 14bigWig
  • 14tsv
  • 4bigBed bed9
Organism
  • 239Homo sapiens
Collection Tags
  • 138EpiMap
  • 50ENCODE
  • 16DGA
  • 13GTEx
  • 10ChIP-Atlas
  • 6 T2DKP
  • 4T2DKP
Biosample type
  • 231tissue
  • 7cell line
  • 1primary cell
Organ
  • 2903vasculature
  • 2855bodily fluid
  • 2844blood
  • 2838blood vessel
  • 2658vein
  • 955epithelium
  • 648kidney
  • 455connective tissue
  • 438brain
  • 371musculature of body
  • 310lung
  • 286intestine
  • 262pancreas
  • 251heart
  • 239limb
  • 215embryo
  • 201skin of body
  • 172large intestine
  • 153liver
  • 145extraembryonic component
  • 118stomach
  • 108eye
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 82adipose tissue
  • 82uterus
  • 77prostate gland
  • 72adrenal gland
  • 72artery
  • 72placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 49thymus
  • 47gonad
  • 42esophagus
  • 41spinal cord
  • 33spleen
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24testis
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 239AMP
Genome assembly (visualization)
  • 234hg19
  • 73GRCh38
annotation_type!
  • eQTL
BIOSAMPLE
TYPE

239 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
Fine-mapped variants
variant allelic effects
gene expression
binding sites
histone modifications
tissue
muscle of arm33161611
muscle of leg2715142
tibial nerve6433322
gastrocnemius medialis8451
tibial artery3323321
cell line
GM23248211111
primary cell
fibroblast of arm1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego