Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 65accessible chromatin
  • 62target gene predictions
  • 57differential activity
  • 48gene expression
  • 24candidate regulatory elements
  • 17chromatin state
  • eQTL
  • 11variant allelic effects
  • 6histone modifications
  • 5Fine-mapped variants
  • 5binding sites
  • 2sQTL
  • 2variant to gene
Date released
  • 46March, 2023
  • 44September, 2022
  • 33May, 2021
  • 30February, 2021
  • 24February, 2024
  • 24May, 2026
  • 20January, 2021
  • 18July, 2026
  • 18November, 2021
  • 9March, 2020
  • 7August, 2018
  • 6May, 2020
  • 6October, 2019
  • 4January, 2020
  • 4June, 2020
  • 3August, 2017
  • 2November, 2019
  • 1April, 2019
  • 1August, 2021
  • 1February, 2020
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 176bed bed3+
  • 75tsv
  • 57bigWig
  • 14bigBed narrowPeak
  • 13bed bed9
  • 3bam
  • 3bed gappedPeak
  • 3csv
  • 3xls
  • 2bigBed bed9
Organism
  • 304Homo sapiens
Collection Tags
  • 65 T2DKP
  • 48HPAP
  • 44T1D
  • 40T2DKP
  • 39EpiMap
  • 34AMP
  • 30DGA
  • 24pyxis
  • 18ENCODE-rE2G
  • 14ChIP-Atlas
  • 11ENCODE
  • 8CMDGA
  • 4GTEx
  • 3T2D
Biosample type
  • 150primary cell
  • 111tissue
  • 37cell line
  • 6in vitro differentiated cells
Organ
  • 3363blood
  • 2896vasculature
  • 2855blood vessel
  • 2851bodily fluid
  • 2659vein
  • 948epithelium
  • 874brain
  • 752kidney
  • 497connective tissue
  • 482heart
  • 439lung
  • 375musculature of body
  • 355intestine
  • 304pancreas
  • 293skin of body
  • 239limb
  • 232liver
  • 224large intestine
  • 215embryo
  • 173extraembryonic component
  • 160eye
  • 139stomach
  • 129adipose tissue
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 101adrenal gland
  • 96placenta
  • 96small intestine
  • 93thymus
  • 92uterus
  • 86prostate gland
  • 83artery
  • 73ureter
  • 64penis
  • 62lymph node
  • 62spleen
  • 61gonad
  • 60__MARKER__
  • 47spinal cord
  • 46thyroid gland
  • 45esophagus
  • 31ovary
  • 29testis
  • 24lymphoid tissue
  • 24skeleton
  • 23nerve
  • 21lymphatic vessel
  • 20mouth
  • 16bronchus
  • 14breast
  • 13bone marrow
  • 13urinary bladder
  • 12pituitary gland
  • 12tongue
  • 11vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 264AMP
  • 20T1D
  • 18ENCODE
  • 2community
Genome assembly (visualization)
  • 176hg19
  • 74GRCh38
annotation_type!
  • eQTL
BIOSAMPLE
TYPE

304 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
target gene predictions
differential activity
gene expression
candidate regulatory elements
chromatin state
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic ductal cell6383121
pancreatic beta cell83331
pancreatic alpha cell73331
pancreatic acinar cell63331
pancreatic delta cell54331
tissue
islet of Langerhans61113112222
pancreas51353111
body of pancreas928413
endocrine pancreas474
pancreatic ductal cell2
cell line
EndoC_BH181381
Panc1321
8988T211
HPDE6-E6E7211
pancreatic acinar cell1
in vitro differentiated cells
pancreatic ductal cell3
islet precursor cell1
progenitor cell of endocrine pancreas1
type B pancreatic cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego