Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
target gene predictions
51
candidate regulatory elements
24
chromatin state
11
accessible chromatin
4
binding sites
3
gene expression
3
histone modifications
eQTL
2
variant allelic effects
Date released
72
September, 2022
53
February, 2024
33
February, 2021
11
November, 2021
5
June, 2020
4
May, 2021
3
March, 2024
1
March, 2020
1
October, 2022
Available data
156
bed bed3+
24
bed bed9
6
bigWig
3
tsv
Organism
183
Homo sapiens
Biosample type
102
tissue
65
cell line
16
primary cell
Organ
956
epithelium
648
kidney
447
connective tissue
437
brain
musculature of body
310
lung
286
intestine
263
vasculature
262
pancreas
251
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
150
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphatic vessel
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
172
AMP
11
ENCODE
Genome assembly (visualization)
180
hg19
86
GRCh38
annotation_type!
eQTL
organ_slims!
adrenal gland
musculature of body
BIOSAMPLE
TYPE
183 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
variant allelic effects
tissue
stomach
21
40
19
3
1
1
uterus
2
3
1
1
1
mucosa of stomach
1
2
1
endometrium cancer
1
1
cervix - ectocervix
1
+ See 2 more…
cell line
HeLa-S3
55
5
3
1
Ishikawa
1
primary cell
Ishikawa
1
1
1
parietal cell
1
1
1
peptic cell
1
1
1
foveolar cell of stomach
1
1
stomach neuroendocrine cell
1
1
+ See 2 more…
See all biosamples
Download