Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 68target gene predictions
  • 9candidate regulatory elements
  • 4binding sites
  • 4chromatin state
  • 3accessible chromatin
  • 2gene expression
  • 2histone modifications
  • eQTL
Date released
  • 51February, 2024
  • 12September, 2022
  • 10February, 2021
  • 10July, 2026
  • 2June, 2020
  • 2March, 2024
  • 2May, 2021
  • 2November, 2021
  • 1October, 2022
Available data
  • 86bed bed3+
  • 4bed bed9
  • 2tsv
  • 1bigWig
Organism
  • 92Homo sapiens
Collection Tags
  • 514DN
  • 12EpiMap
  • 10ENCODE-rE2G
  • 7ChIP-Atlas
  • 6ENCODE
  • 2AMP
  • 2DGA
  • 2GTEx
  • 2T2DKP
Biosample type
  • 73cell line
  • 14tissue
  • 5primary cell
Organ
  • 3363blood
  • 2896vasculature
  • 2855blood vessel
  • 2851bodily fluid
  • 2659vein
  • 948epithelium
  • 874brain
  • 752kidney
  • 497connective tissue
  • 482heart
  • 439lung
  • 375musculature of body
  • 355intestine
  • 304pancreas
  • 293skin of body
  • 239limb
  • 232liver
  • 224large intestine
  • 215embryo
  • 173extraembryonic component
  • 160eye
  • 139stomach
  • 129adipose tissue
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 101adrenal gland
  • 96placenta
  • 96small intestine
  • 93thymus
  • 92uterus
  • 86prostate gland
  • 83artery
  • 73ureter
  • 64penis
  • 62lymph node
  • 62spleen
  • 61gonad
  • 60__MARKER__
  • 47spinal cord
  • 46thyroid gland
  • 45esophagus
  • 31ovary
  • 29testis
  • 24lymphoid tissue
  • 24skeleton
  • 23nerve
  • 21lymphatic vessel
  • 20mouth
  • 16bronchus
  • 14breast
  • 13bone marrow
  • 13urinary bladder
  • 12pituitary gland
  • 12tongue
  • 11vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 90AMP
  • 2ENCODE
Genome assembly (visualization)
  • 80hg19
  • 67GRCh38
annotation_type!
  • eQTL
BIOSAMPLE
TYPE

92 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
gene expression
histone modifications
cell line
HeLa-S359513
Ishikawa41
tissue
uterus43111
endometrium cancer11
cervix - ectocervix1
endometrium1
primary cell
Ishikawa111
uterine smooth muscle cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego