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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • eQTL
  • 172differential activity
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 5variant allelic effects
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2586February, 2021
  • 2511September, 2022
  • 386May, 2021
  • 333November, 2021
  • 315February, 2024
  • 289June, 2020
  • 286September, 2023
  • 128March, 2020
  • 101August, 2021
  • 101October, 2022
  • 89January, 2020
  • 76May, 2020
  • 69March, 2023
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 38February, 2020
  • 38May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 20March, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5January, 2022
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5831bed bed3+
  • 3531tsv
  • 869bed bed9
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 12bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10296Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 964ENCODE
  • 506AMP
  • 506DGA
  • 376T2DKP
  • 317T1D
  • 281KPMP
  • 216BLUEPRINT
  • 1744DN
  • 151 T2DKP
  • 127GTEx
  • 99CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 25STARNET
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 10T2D
Biosample type
  • 5146tissue
  • 2387primary cell
  • 2340cell line
  • 464in vitro differentiated cells
  • 4stem cell
Organ
  • 2888vasculature
  • 2855bodily fluid
  • 2844blood
  • 2829blood vessel
  • 2657vein
  • 914epithelium
  • 632kidney
  • 439connective tissue
  • 421brain
  • 364musculature of body
  • 309lung
  • 283intestine
  • 251pancreas
  • 241heart
  • 231limb
  • 215embryo
  • 200skin of body
  • 172large intestine
  • 149liver
  • 145extraembryonic component
  • 116stomach
  • 106eye
  • 89bone element
  • 86mammary gland
  • 83small intestine
  • 82uterus
  • 79adipose tissue
  • 76prostate gland
  • 72placenta
  • 71adrenal gland
  • 68artery
  • 64penis
  • 62lymph node
  • 61ureter
  • 49thymus
  • 47gonad
  • 41spinal cord
  • 40esophagus
  • 33spleen
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24testis
  • 22ovary
  • 21nerve
  • 21thyroid gland
  • 18mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 10tongue
  • 10urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9637AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 11community
  • 2ITG
Genome assembly (visualization)
  • 6819hg19
  • 1783GRCh38
  • 1hg18
annotation_type!
  • eQTL
software_used.software.name!
  • deltasvm
BIOSAMPLE
TYPE

10343 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant allelic effects
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720121513
stomach402111931
kidney29142161017
brain2916318211
primary cell
monocyte28618115121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
B cell1710862
endothelial cell37115292
cell line
HeLa-S355531
A549211911812
H1-hESC13911128
K5627231712
MCF-7962513
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4616411
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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