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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
histone modifications
2
eQTL
gene expression
Date released
98
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
1
March, 2020
1
October, 2022
Available data
132
bed bed3+
33
bed bed9
3
bigWig
Organism
167
Homo sapiens
Biosample type
130
tissue
31
cell line
6
primary cell
Organ
678
epithelium
444
kidney
399
brain
394
connective tissue
357
musculature of body
306
lung
278
intestine
237
limb
230
heart
225
vasculature
223
pancreas
194
embryo
192
bodily fluid
189
skin of body
182
blood
173
blood vessel
167
large intestine
141
extraembryonic component
120
liver
116
stomach
104
eye
84
small intestine
82
mammary gland
79
bone element
79
uterus
75
adipose tissue
72
adrenal gland
70
placenta
70
prostate gland
64
ureter
62
artery
59
penis
58
lymph node
48
thymus
47
gonad
43
esophagus
42
spinal cord
33
spleen
24
testis
23
nerve
22
lymphoid tissue
22
ovary
22
thyroid gland
21
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
12
breast
11
bone marrow
11
pituitary gland
9
tongue
9
urinary bladder
9
vagina
4
nose
3
trachea
Project
161
AMP
6
ENCODE
Genome assembly (visualization)
165
hg19
43
GRCh38
annotation_type!
gene expression
histone modifications
month_released!
August, 2020
BIOSAMPLE
TYPE
167 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
eQTL
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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